Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_J06
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.22 
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516...    33   0.39 
12_01_0816 + 7502669-7503145                                           29   4.8  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    29   6.4  
10_05_0078 + 8891364-8891529,8891535-8891797                           28   8.5  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 278 RKRHASRREKGGQVSGKRQGRNQESARGSFQGETPG 171
           R R   RR  GG+V+G+   R++   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
            14351740-14351840,14351960-14352032,14352111-14352252,
            14353239-14353399,14354017-14354129,14354226-14354325,
            14354580-14354676,14354798-14354849,14355074-14355175,
            14355256-14355402,14355485-14355656,14355752-14355991,
            14356565-14356621,14356853-14356942,14357089-14357284,
            14358117-14358228,14358305-14358459,14359155-14360580,
            14360663-14360857,14361214-14361684
          Length = 1540

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 658  PEKKGSPEDPFDLSXXGLTPQXEPXLPSREFWSXKIIXXGFSPXIPFLN 804
            P++ G P DP  L   G+ PQ +P LPS+   +      GF P IP ++
Sbjct: 1243 PQQPGMPMDPISLPDGGVPPQSQP-LPSQP-QALPPQPHGFQPAIPAMS 1289


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 375 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 244
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 292 QREL*ESATLPEGRKAD-RYPVSGRVGTRRAHEGASRGKRLVS 167
           QREL   AT P     D R  ++GR   RR  + A+R +R VS
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>10_05_0078 + 8891364-8891529,8891535-8891797
          Length = 142

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 195 PSCALLVPTLPLTGYLSAFLPS 260
           P CA L P +P+ G L  F+PS
Sbjct: 92  PPCAFLPPDVPVEGILMIFVPS 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,150,579
Number of Sequences: 37544
Number of extensions: 537521
Number of successful extensions: 1628
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)