Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J06
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 32 3.1
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 32 3.1
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein. 31 5.4
AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20 pro... 31 5.4
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 30 9.5
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 30 9.5
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 30 9.5
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 242 QVSGKRQGRNQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTP-SNAA 66
++ G +G Q S+ G++P + GFA+ + +F +A GG + +P S +
Sbjct: 574 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 633
Query: 65 FLQVP 51
+L VP
Sbjct: 634 YLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 242 QVSGKRQGRNQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTP-SNAA 66
++ G +G Q S+ G++P + GFA+ + +F +A GG + +P S +
Sbjct: 575 RLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPS 634
Query: 65 FLQVP 51
+L VP
Sbjct: 635 YLSVP 639
>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 151 PDRTIKIPGVSPWKLPRALSWFRPCRLPDTCPPFSLREAWRFLI-AHAVGISVRCRSFAP 327
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 328 SWAVCTN-PPFSPTAAP 375
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 151 PDRTIKIPGVSPWKLPRALSWFRPCRLPDTCPPFSLREAWRFLI-AHAVGISVRCRSFAP 327
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 328 SWAVCTN-PPFSPTAAP 375
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 151 PDRTIKIPGVSPWKLPRALSWFRPCRLPDTCPPFSLREAWRFLI-AHAVGISVRCRSFAP 327
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 269
Query: 328 SWAVCTN-PPFSPTAAP 375
SW + T PP S T P
Sbjct: 270 SWKLGTTVPPISFTPGP 286
>AF174600-1|AAF04521.1| 255|Homo sapiens F-box protein Fbx20
protein.
Length = 255
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 151 PDRTIKIPGVSPWKLPRALSWFRPCRLPDTCPPFSLREAWRFLI-AHAVGISVRCRSFAP 327
PDR +P PW LP + C L TCP + R L+ ++
Sbjct: 84 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQ 143
Query: 328 SWAVCTN-PPFSPTAAP 375
SW + T PP S T P
Sbjct: 144 SWKLGTTVPPISFTPGP 160
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 254 EKGGQVSGKRQGRNQESARGS 192
EKG +VSGKR+GRN +A S
Sbjct: 3 EKGPEVSGKRRGRNNAAASAS 23
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 254 EKGGQVSGKRQGRNQESARGS 192
EKG +VSGKR+GRN +A S
Sbjct: 3 EKGPEVSGKRRGRNNAAASAS 23
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 254 EKGGQVSGKRQGRNQESARGS 192
EKG +VSGKR+GRN +A S
Sbjct: 3 EKGPEVSGKRRGRNNAAASAS 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,345,365
Number of Sequences: 237096
Number of extensions: 2784274
Number of successful extensions: 11300
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11287
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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