Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J04
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.61
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.9
07_03_0559 + 19475893-19476783 29 4.3
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 4.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.7
01_01_0162 - 1394980-1395760,1396024-1396037 29 5.7
01_01_0159 + 1380421-1381143 29 5.7
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 28 7.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 7.5
06_02_0126 + 12130409-12130532,12131015-12131373 28 9.9
02_04_0343 - 22166148-22166318,22166422-22166465,22166563-221666... 28 9.9
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 28 9.9
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.61
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +1
Query: 544 PPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPPX*XPXXNNXXFXXXXXRXXXFFFXP 723
PPPP P PP K P P PP P P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPK---GPPPPPPAKGPPPPPPPKGPSPP---PP 367
Query: 724 XPPGGGXGGXXPPP 765
PPGG GG PPP
Sbjct: 368 PPPGGKKGGPPPPP 381
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/108 (27%), Positives = 34/108 (31%), Gaps = 5/108 (4%)
Frame = +1
Query: 457 GPXXPPLXXGVFWG-----PPXXXKXXXGXXXGXPPPPXNPPXKKXPPXXXXXKXXXXXP 621
GP PPL + W PP G G P PP +PP PP
Sbjct: 1027 GPQLPPLSH-LEWKRCPHHPPERPHYLPGEVGGAPSPP-SPP----PPQRENTSVGIQGG 1080
Query: 622 LPXFXWXPPX*XPXXNNXXFXXXXXRXXXFFFXPXPPGGGXGGXXPPP 765
+P PP P + P PP GG G PPP
Sbjct: 1081 IPPL---PPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPP 1125
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = -3
Query: 659 GF*XGGXXKKXGRGXXXXXFXXXKXGGXFLXGGFXGGGGXPXXXPKXXFXXFGGPQKTPX 480
GF GG G G F GG GG GGGG GG Q
Sbjct: 86 GFGGGGGGGLGGGGCEGGGFGGGVGGGSGAGGGLGGGGGGGFGGGSGGGVGGGGGQGGGF 145
Query: 479 XRGGXXG 459
GG G
Sbjct: 146 GAGGGVG 152
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +1
Query: 544 PPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPPX*XPXXNNXXFXXXXXRXXXFFFXP 723
PPPP P K PP K P P PP P + P
Sbjct: 56 PPPPPPPQPAKEPPPPTKPKH----PKPKQQQHPPPPPPQK--------PPQGSTNLSLP 103
Query: 724 XPPGGGXGGXXPPPXXQ 774
P G G G PPP Q
Sbjct: 104 NPSGSGSGNGNPPPSPQ 120
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 721 PXPPGGGXGGXXPPPXXQKTPXXPRP 798
P P G G PPP P PRP
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRP 363
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/88 (25%), Positives = 24/88 (27%), Gaps = 5/88 (5%)
Frame = +1
Query: 544 PPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPPX*XPXXN---NXXFXXXXXRXXXFF 714
PPPP P PP P P PP P N +
Sbjct: 30 PPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMY 89
Query: 715 FXPXPPGG--GXGGXXPPPXXQKTPXXP 792
+ P PP G PPP P P
Sbjct: 90 YQPPPPPPPYGVNSSQPPPPPPPPPSPP 117
>01_01_0162 - 1394980-1395760,1396024-1396037
Length = 264
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 156 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 293
R+C +H +LY CP A HD H C CFC P
Sbjct: 33 RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 82
>01_01_0159 + 1380421-1381143
Length = 240
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 156 RKCPKGEHSVLY-----CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRP 293
R+C +H +LY CP A HD H C CFC P
Sbjct: 9 RRCVAVDH-ILYAITVPCPNAAHGCAARTPYHDSHGHAAGCPHAPCFCPEP 58
>10_03_0021 +
7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 193 ALKWPSRTVRIPKSTISLTTWAHATYHSASATGLMS-GTRKL 315
A P+ +RIP S I W+ Y++ S +G M+ GT L
Sbjct: 498 AFSLPNWILRIPYSFIEAVVWSCVVYYTVSVSGNMTVGTNIL 539
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 544 PPPPXNPPXKKXPPXXXXXKXXXXXPLP 627
PPPP PP + PP K P P
Sbjct: 362 PPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 647 GGXXKKXGRGXXXXXFXXXKXGGXFLXGGFXGGGG 543
GG + GRG GG + GG+ GGGG
Sbjct: 121 GGGYEGYGRGYGGGGGGGGYGGGGYPGGGYYGGGG 155
>02_04_0343 -
22166148-22166318,22166422-22166465,22166563-22166626,
22166729-22167109,22167296-22167475,22167661-22167790,
22167844-22167946,22168060-22168093,22168216-22168300,
22168389-22168453,22168592-22168690,22168960-22169025,
22169200-22169439
Length = 553
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 301 RTLGRSQKHCGTSHGPTWS 245
R LG +++HC T GP WS
Sbjct: 147 RHLGDTKEHCSTYTGPRWS 165
>01_06_1801 -
39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 317 ASFRVPDIRPVAEALWYVAWAHVVNEI 237
A+FRVPD P+A L+ + WA V ++
Sbjct: 29 AAFRVPDPVPMARFLYELCWAVVRGDL 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,969,110
Number of Sequences: 37544
Number of extensions: 407545
Number of successful extensions: 2162
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1936
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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