Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J04
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.006
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 2.9
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.9
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 29 5.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.1
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 6.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 6.8
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 8.9
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 8.9
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 28 8.9
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 150 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 320
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 321 CVPESEC 341
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 192 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 341
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 96 IVLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 272
+V FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 273 QCFCDRPNVRNTKTGKCVPESECX*NCVKS 362
+C C NVRN TG +P NCV +
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVST 93
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 84 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 173
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 84 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 173
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 493 WGPPXXXKXXXGXXXGXPPPPXN--PPXKKXPP 585
WGPP G PPPP + PP + PP
Sbjct: 38 WGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPP 70
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 364 IDFTQFYXHSDSGTHLPVFVFRTLGRSQKHCGTSH--GPTWSTKSWTSGF 221
+D +F S L T+G+S++HC + + P W + W GF
Sbjct: 66 LDCVRFGPRSPQNDELLGQFVNTVGKSEEHCLSLNVFTPKWESNEWPDGF 115
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 727 PPGGGXGGXXPPPXXQKTPXXPR 795
P GGG GG PP K P PR
Sbjct: 631 PGGGGGGGPTGPPAPPKPPAKPR 653
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 457 GPXXPPLXXGVFWGPPXXXKXXXGXXXGXPPPPXNPPXKKXP 582
GP PP + GPP + G G PP PP + P
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPY-GPPGGYPPQQQRPPYQAQP 719
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 457 GPXXPPLXXGVFWGPPXXXKXXXGXXXGXPPPPXNPPXKKXP 582
GP PP + GPP + G G PP PP + P
Sbjct: 679 GPPPPPQGQQYYGGPPPPGQPY-GPPGGYPPQQQRPPYQAQP 719
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 727 PPGGGXGGXXPPPXXQKTPXXPR 795
P GGG GG PP K P PR
Sbjct: 631 PGGGGGGGPTGPPAPPKPPAKPR 653
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 71 ENVSNEKFYCIVVCCGSCRLRHRATFS 151
+N+ +E+F+C+ CC RL T++
Sbjct: 196 KNLLDEEFFCLAPCCSGMRLFQAETYT 222
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 71 ENVSNEKFYCIVVCCGSCRLRHRATFS 151
+N+ +E+F+C+ CC RL T++
Sbjct: 235 KNLLDEEFFCLAPCCSGMRLFQAETYT 261
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.1
Identities = 28/99 (28%), Positives = 29/99 (29%)
Frame = +1
Query: 469 PPLXXGVFWGPPXXXKXXXGXXXGXPPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPP 648
PP+ G PP G PPP PP PP LP PP
Sbjct: 707 PPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-----LPPISGGPP 759
Query: 649 X*XPXXNNXXFXXXXXRXXXFFFXPXPPGGGXGGXXPPP 765
P P PPGG GG PPP
Sbjct: 760 PPPPPPGGCPPPPP----------PPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.1
Identities = 28/99 (28%), Positives = 29/99 (29%)
Frame = +1
Query: 469 PPLXXGVFWGPPXXXKXXXGXXXGXPPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPP 648
PP+ G PP G PPP PP PP LP PP
Sbjct: 707 PPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-----LPPISGGPP 759
Query: 649 X*XPXXNNXXFXXXXXRXXXFFFXPXPPGGGXGGXXPPP 765
P P PPGG GG PPP
Sbjct: 760 PPPPPPGGCPPPPP----------PPPPGGFKGGPPPPP 788
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 496 GPPXXXKXXXGXXXGXPPPPXNPPXKKXPP 585
GPP G G PPPP P PP
Sbjct: 34 GPPPACGNPCGGGFGPPPPPFGPVGYALPP 63
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.1
Identities = 28/99 (28%), Positives = 29/99 (29%)
Frame = +1
Query: 469 PPLXXGVFWGPPXXXKXXXGXXXGXPPPPXNPPXKKXPPXXXXXKXXXXXPLPXFXWXPP 648
PP+ G PP G PPP PP PP LP PP
Sbjct: 290 PPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG-----LPPISGGPP 342
Query: 649 X*XPXXNNXXFXXXXXRXXXFFFXPXPPGGGXGGXXPPP 765
P P PPGG GG PPP
Sbjct: 343 PPPPPPGGCPPPPP----------PPPPGGFKGGPPPPP 371
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 792 GGXGGFLXGXGRXXXPXPPPXGXGXKKK 709
GG GG G GR P PPP G G +++
Sbjct: 199 GGSGGSGGGSGRFPPP-PPPYGGGGRRR 225
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 721 PXPPGGGXGGXXPPP 765
P PP GG GG PPP
Sbjct: 662 PVPPPGGLGGFMPPP 676
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 721 PXPPGGGXGGXXPPP 765
P PP GG GG PPP
Sbjct: 662 PVPPPGGLGGFMPPP 676
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 177 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC 341
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGC 213
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 177 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC 341
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGC 213
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/68 (29%), Positives = 24/68 (35%)
Frame = +3
Query: 138 GQHFPTRKCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTG 317
GQ P C C EP C NP C C C VRN T
Sbjct: 32 GQRLP---CRGRNEEYKTCGTACEPSCTNPNPMC----TKQCINNVCQCRSGYVRNEITR 84
Query: 318 KCVPESEC 341
+CV +++C
Sbjct: 85 QCVRQAQC 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,083,745
Number of Sequences: 27780
Number of extensions: 309011
Number of successful extensions: 1206
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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