Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_J02
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    30   0.081
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.19 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.25 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.3  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 30.3 bits (65), Expect = 0.081
 Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
 Frame = +3

Query: 459 FSKGKXPPPPXXPPPXXPPPPXPPXXXXPG-AGXPPXXEXYXAPXPX*NXWHXLXPPP-- 629
           F+ G   P    PPP    PP P     PG  G PP       P P       + PPP  
Sbjct: 67  FTAGPPKPNISIPPPTMNMPPRP--GMIPGMPGAPPLLMGPNGPLPP--PMMGMRPPPMM 122

Query: 630 XXTAGKKXLFLXXXRPLXPLXVPXXNP 710
             T G   + L    P+     P  NP
Sbjct: 123 VPTMGMPPMGLGMRPPVMSAAPPQLNP 149


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 0.19
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 477 PPPPXXPPPXXPPPPXP 527
           PPP   PPP   PPP P
Sbjct: 581 PPPAPPPPPPMGPPPSP 597



 Score = 28.7 bits (61), Expect = 0.25
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 459 FSKGKXPPPPXXPPPXXPPPPXPPXXXXPGAGXP 560
           F  G    P   PPP  PPPP       P AG P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGP 602



 Score = 27.5 bits (58), Expect = 0.57
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 480 PPPXXPPPXXPPPPXPPXXXXPGAG 554
           PPP  PPP    PP  P    P  G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGG 605



 Score = 24.2 bits (50), Expect = 5.3
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +3

Query: 477 PPPPXXPPPXXPPPPXPPXXXXPGAGXPP 563
           P PP  PP   PP P         AG  P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 25/121 (20%), Positives = 37/121 (30%), Gaps = 1/121 (0%)
 Frame = +3

Query: 483 PPXXPPPXXPPPPXPPXXXXPGAGXPPXXEXYXAPXPX*NXWHXLXP-PPXXTAGKKXLF 659
           PP    P  P PP P        G P        P         + P PP     ++   
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPM 259

Query: 660 LXXXRPLXPLXVPXXNPXQPX*XHXXASIXSSPXXAXVXXPPXXXPXKXNSPHXPPRXQX 839
           +    P+ P   P   P +P      +++        V  P    P +  +P  PP+   
Sbjct: 260 MGQPPPIRP-PNPMGGP-RPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMR 317

Query: 840 P 842
           P
Sbjct: 318 P 318



 Score = 23.4 bits (48), Expect = 9.3
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
 Frame = +3

Query: 468 GKXPPPPXXPPPXXPP-PPXPPXXXXPG-AGXPPXXEXYXAP 587
           G  P PP  P P  P  PP       PG    PP  +    P
Sbjct: 216 GMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP 257


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +3

Query: 456 AFSKG-KXPPPPXXPPPXXPPPPXPP 530
           AF+ G   PPPP  PPP    P   P
Sbjct: 775 AFADGIGSPPPPPPPPPSSLSPGGVP 800



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +3

Query: 498 PPXXPPPPXPPXXXXPGAGXP 560
           PP  PPPP PP    PG G P
Sbjct: 783 PP--PPPPPPPSSLSPG-GVP 800


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 562  GGXPAPGXXXXGGXGGG 512
            GG P  G    GG GGG
Sbjct: 1487 GGSPTKGAGGGGGGGGG 1503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,091
Number of Sequences: 2352
Number of extensions: 15570
Number of successful extensions: 167
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)