Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_J01
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.27
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.27
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.47
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.47
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.62
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.4
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 4.4
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 4.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 7.6
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/102 (30%), Positives = 35/102 (34%)
Frame = +1
Query: 529 PXAPPP*TSITKIDAQVXGGXXPTGLXRXHXFPPXXLPXALSXFPXCXLPDTCPXLSPXP 708
P APPP I + P G PP P +L LP + P P
Sbjct: 388 PPAPPP-----AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG 442
Query: 709 GTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
AP LP P P P P +PP PP P PP
Sbjct: 443 APAAP--PLP----PSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 35.5 bits (78), Expect = 0.009
Identities = 25/99 (25%), Positives = 33/99 (33%)
Frame = +2
Query: 539 RPPEXASXKSTLKSXVAXPRXDYXDXTXFPPXXSLXRSPXSXPAXYXIPVPPFLPXREPW 718
+PP +S ++ P PP + R+ S P +P PP LP P
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT--STPP---VPTPPSLPPSAPP 429
Query: 719 XLSHXSPXXXPXXXXXVPPXHXXXXXPPXPPXPXPXXPP 835
L +P P PP P P P PP
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 30.7 bits (66), Expect = 0.27
Identities = 25/90 (27%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = +2
Query: 575 KSXVAXPRXDYXDXTXFPPXXSLXRSPXSXPAXYXIPVPPFLPXREPWX--LSHXSPXXX 748
+S A P T PP + P S P PP LP P L +P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 749 PXXXXX--VPPXHXXXXXPPXPPXPXPXXP 832
P PP PP P P P P
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.82
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 682 TCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXP 831
+ P + P + P +P +P P P P SPP P P P
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 676 PDTCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPP 810
P P + P AP P P P P P P +PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 709 GTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
G +AP P P PP +PPPPP + PP
Sbjct: 1679 GGMAPAH--PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 721 PFSXLPXXVS-PXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
P S P +S P P P P +PP P P PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 706 PGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXP 831
P + AP P P P PP P P PP P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPSAPPPP 1734
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.27
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -2
Query: 830 GXXGVXGGGGGXXGXXXGGXGXXXGXGXTXXGXYEKGARVPGXGERXGQVSGKXQXGXQE 651
G G GG G G GG G G G GAR G G R G G+ G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGGR---GGSS 61
Query: 650 SAXGXXQGG 624
G +GG
Sbjct: 62 GGRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.47
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXLPDTCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPP 804
PP +P S P LP P P T AP +P P P P P P
Sbjct: 1012 PP--VPKLSSKAPPVPLPSADAPPIPVPST-APPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Query: 805 PPPXTPXXP 831
P P P
Sbjct: 1069 PSSEIPSIP 1077
Score = 29.5 bits (63), Expect = 0.62
Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXL-PDTCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXP--X 795
PP +P + P + P P P + P P P P PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 796 SPPPPPXTPXXPP 834
+PP P + PP
Sbjct: 1101 APPVPKPSVAVPP 1113
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/102 (21%), Positives = 27/102 (26%)
Frame = +1
Query: 529 PXAPPP*TSITKIDAQVXGGXXPTGLXRXHXFPPXXLPXALSXFPXCXLPDTCPXLSPXP 708
P APPP + + + + PP P + P P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA--PPVPKPSVAVPPVPAP 1117
Query: 709 GTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
P P P PP P PP P P
Sbjct: 1118 SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXLPDTCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXS-- 798
PP +P S P P P P P V P P PP P +
Sbjct: 1169 PP--VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 799 PPPPPXTPXXPP 834
PP P T PP
Sbjct: 1227 PPVPVPTAKAPP 1238
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXLPDTCPXLSPXPGTLAPFSXLPXX-VSPXPXXXPXPPXXXPXSP 801
P L +S P L P P + AP LP P P PP P S
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPV--PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTST 1049
Query: 802 PPPPXTPXXPP 834
PP P + P
Sbjct: 1050 PPVPKSSSGAP 1060
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +1
Query: 688 PXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTP 822
P +P P + P P + P P PP PPPPP P
Sbjct: 742 PTPAPAPIPVPP----PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.82
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 697 SPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
SP P A P +P P P P P PPPPP P
Sbjct: 731 SPPPPPPAVIVPTPAP-APIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 735 PPVRXPXXXXXSXPXTPAPXXPPXPPXHXXPPPP 836
PP P + P P PP P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Frame = +1
Query: 649 LSXFPXCXLPDTCPXLSPXPGTL--APFSXLPXXVSPXPXXXP---XPPXXXPXSPPPPP 813
+S P LPD + L +P P + P P P PP PPPPP
Sbjct: 706 ISSSPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Query: 814 XTP 822
P
Sbjct: 766 PPP 768
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 661 PXCXLPDTCPXLSPXPGTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPP 813
P +P P P P AP P P P P P PPPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPP-APIMGGPPPPPPPPGVAGAGP---PPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.62
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 757 PXXXPXPPXXXPXSPPPPPXTP 822
P P PP P S PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 745 VSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
VSP P P PPPP P PP
Sbjct: 219 VSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect = 5.8
Identities = 28/102 (27%), Positives = 31/102 (30%)
Frame = +1
Query: 529 PXAPPP*TSITKIDAQVXGGXXPTGLXRXHXFPPXXLPXALSXFPXCXLPDTCPXLSPXP 708
P PPP DA +G PP P P P P P
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLP-------APP-PPPP 243
Query: 709 GTLAPFSXLPXXVSPXPXXXPXPPXXXPXSPPPPPXTPXXPP 834
TL P S + P P + PPPP TP PP
Sbjct: 244 PTLPPQSTNTSQL-PMPSRNVNN-LGSQVNIPPPPATPSQPP 283
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 715 LAPFSXLPXXVSPX-PXXXPXPPXXXPXSPPP-PPXTPXXPP 834
LAP S +P +P P P PP S P P P PP
Sbjct: 400 LAPTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSLPP 441
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXLPDTCPXLSPX--PGTLA-PFSXLPXXVSPXPXXXPXPPXXXPX 795
P L A + P +P+ P + PG A P +P P P PP
Sbjct: 240 PNVPLVGATTAVPPLSIPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVPPPPPGMVMA 299
Query: 796 SPPPPPXT-PXXP 831
SP P T P P
Sbjct: 300 SPSPAAATIPGAP 312
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Frame = +1
Query: 625 PPXXLPXALSXFPXCXLPDTCPXLSPX-PGTLAPF-SXLPXXVSPX-PXXXPXPPXXXPX 795
P L S P +P P +P P P S LP P P P P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192
Query: 796 SPPPPPXTPXXPP 834
+ PP P PP
Sbjct: 193 AVPPMPPKVPPPP 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,549,220
Number of Sequences: 5004
Number of extensions: 44212
Number of successful extensions: 268
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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