Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I22
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197...    31   1.6  
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    28   8.6  

>07_03_0910 -
           22519006-22519159,22519300-22519355,22519433-22519702,
           22519808-22519986,22520146-22520374,22520985-22521180,
           22521728-22521818,22521921-22521975,22522812-22522902,
           22523366-22523424,22524000-22524050
          Length = 476

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 23/77 (29%), Positives = 38/77 (49%)
 Frame = -3

Query: 439 GIIDVFRIFVAYTXTHAPAAPS*YSLSVEHSCHSTXLKTSSSAPFGLASSISVFRTFKST 260
           GI D+F+   A T + APAAP    ++V++   S   K+S  +P+ +      F T +  
Sbjct: 283 GIEDLFKDSPAVTVSSAPAAP---QVNVKNDIMSLFEKSSMVSPYAVQQQQLAFMTPQQL 339

Query: 259 SPLRQFPKVRNAASTSG 209
           + L Q   +  AA  +G
Sbjct: 340 ALLSQQQALLMAALKAG 356


>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
 Frame = +3

Query: 147 FSQITAVVTSQCTKNNAEX------KVPEVEAALRTFGNCLXGLVDLNVLKTEIEEAKPN 308
           FSQ T V+ +Q  + +         K   V  A R++G  L GLV ++V +  + E+KP+
Sbjct: 109 FSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYG--LTGLVRISVKEHNVIESKPD 166

Query: 309 GALDEV 326
             LD++
Sbjct: 167 HFLDDL 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,885,253
Number of Sequences: 37544
Number of extensions: 323415
Number of successful extensions: 668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)