Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I22
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    31   1.1  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q...    29   5.8  
U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    28   7.7  

>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +3

Query: 123 AAGVLADDFSQITAVVTSQCTKNNAEXKVPEVEAALRT 236
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +3

Query: 123 AAGVLADDFSQITAVVTSQCTKNNAEXKVPEVEAALRT 236
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 85
            protein.
          Length = 2203

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 410  NEYAKHINDAQNSTNQTHRLCVLQGTEXGLLCSSRKAA 523
            N Y + +N A +   Q  R+ VLQ  E  L C  +K A
Sbjct: 1762 NTYLEILNAANSPQQQQQRILVLQNLEMFLQCEEQKLA 1799


>U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical
           protein C17H11.6c protein.
          Length = 778

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 425 HINDAQNSTNQTHRLCVLQGTEXGLLCSSRKAAL 526
           HI   + S++  HR CV++  + GLL +   AAL
Sbjct: 589 HIKGPKLSSSSIHRGCVIERDDDGLLFTEEGAAL 622


>U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical
           protein C17H11.6b protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 425 HINDAQNSTNQTHRLCVLQGTEXGLLCSSRKAAL 526
           HI   + S++  HR CV++  + GLL +   AAL
Sbjct: 592 HIKGPKLSSSSIHRGCVIERDDDGLLFTEEGAAL 625


>U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical
           protein C17H11.6a protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 425 HINDAQNSTNQTHRLCVLQGTEXGLLCSSRKAAL 526
           HI   + S++  HR CV++  + GLL +   AAL
Sbjct: 589 HIKGPKLSSSSIHRGCVIERDDDGLLFTEEGAAL 622


>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 123 AAGVLADDFSQITAVVTSQCTK---NNAEXKVPEVEAALRTFGN 245
           AAG+    +SQI A +T +CTK     A  K PE    + T+ N
Sbjct: 6   AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,638,336
Number of Sequences: 27780
Number of extensions: 300927
Number of successful extensions: 665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)