Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I21
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.019
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 0.034
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.043
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.53
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.70
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 0.79
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 0.92
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 23 3.0
SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.7
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 27 3.7
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 27 3.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 4.9
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 4.9
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 4.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 6.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 8.6
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 26 8.6
SPAC630.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 502 VPXPXXXPPPPPPPPPXXXXPXXPRDXPX**GVTWAPPPXP 624
VP P P P PPP P P P P G PPP P
Sbjct: 741 VPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.057
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPPPXXXXPXXPRDXP 585
P P P PPPPPPPP P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPPPXXXXPXXPRDXP 585
P P PPPPPPP P P P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.70
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 523 PPPPPPPPP 549
PPPPPPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
Frame = +1
Query: 499 PVPXPXXXPPP------PPPPPP 549
P P P PPP PPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 510 PXXPPXPPPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXP 632
P P P PPP P PP P V G G PP P
Sbjct: 744 PAPAPIPVPPPAPI-MGGPPPPPPPPGVAG-AGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 519 PPXPPPPPPPXXXXSPPAAGXXPLV 593
PP PPPPP PP P V
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 528 PPPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXPXXPLGDQTP 659
PPPPP PA P +G PP P G P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 523 PPPPPPPPPXXXXPXXPRDXPX**GVTWAPPPXP 624
PPPPPP P P + PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect(2) = 0.019
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 523 PPPPPPPPP 549
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 510 PXXPPXPPPPPP 545
P PP PPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 511 PXXXPPPPPPPP 546
P PPPPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 498 TSTXPXXPPXPPPPPPPXXXXSPPAAG 578
TS P PPPPPPP S AAG
Sbjct: 935 TSVAGVMPAFPPPPPPPPPLVS--AAG 959
Score = 23.8 bits (49), Expect(2) = 0.019
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 502 VPXPXXXPPPPPPPP 546
+P P PPPPPP
Sbjct: 898 LPTIITHPTPPPPPP 912
Score = 22.6 bits (46), Expect(2) = 9.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 522 PXPPPPPPPXXXXSPPAAG 578
P PPPPPP A G
Sbjct: 942 PAFPPPPPPPPPLVSAAGG 960
Score = 21.0 bits (42), Expect(2) = 9.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 501 STXPXXPPXPPPPPPP 548
++ P P PPPPP
Sbjct: 896 TSLPTIITHPTPPPPP 911
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect(2) = 0.034
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 VXPVPXPXXXPPPPPPPPP 549
V P P PPPPPP P
Sbjct: 345 VMPTPQVQGSRPPPPPPMP 363
Score = 25.8 bits (54), Expect(2) = 0.034
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 523 PPPPPPPPPXXXXPXXP 573
PPPPP P P P P
Sbjct: 357 PPPPPMPAPIYNVPNVP 373
Score = 22.6 bits (46), Expect(2) = 4.7
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 528 PPPPPPPXXXXSPPAAGXXPLV 593
PPPPP P + P P V
Sbjct: 357 PPPPPMPAPIYNVPNVPTVPTV 378
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 519 PPXPPPPPPP 548
PP PPP P P
Sbjct: 356 PPPPPPMPAP 365
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.043
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 519 PPXPPPPPPPXXXXSPPAAGXXPLVRGYL 605
PP PPPPPP PP+ P GY+
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYV 33
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +3
Query: 501 STXPXXPPXPPPPP---PPXXXXSPPAAG 578
S P PP PPPPP PP PP G
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 29.1 bits (62), Expect = 0.92
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPPP 549
P P P PP PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 511 PXXXPPPPPPPPPXXXXPXXPRDXP 585
P PPPPPPPP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 599 TPH*XGXSRGXXGXXXXGGGGGGGGGXXXGXGTG 498
TP G SRG G GG GG GG G G G
Sbjct: 442 TPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.17
Identities = 32/142 (22%), Positives = 38/142 (26%), Gaps = 4/142 (2%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPPPXXXXPXXPRDXPX**GVTWAPPPXPXXXXXXXXXXXXXXNCXX 678
P+P PPPPPP P V+ P P P N
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 679 XQLXXIXXXXXGPXXXXPXXPLFXXSXI---NPXXPPHPXXXPXHVXPAPRGQXVGRVXS 849
+ P P P + P PP P P P P G
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAPPLP 470
Query: 850 LAXXXPAPTP-PGTXXXLAXLA 912
A P P P P +A +A
Sbjct: 471 PAAPAPPPAPAPAPAAPVASIA 492
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 487 TXVXPVPXPXXXPPPPPPPPPXXXXPXXPRDXP 585
T PVP P PP PP P P P P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 29.1 bits (62), Expect = 0.92
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = +3
Query: 528 PPPPPPPXXXXSPPAAGXXPL-VRGYLGXPPXTXXPXXPLGDQTPXXQLXXEXTXLXXXX 704
PPPPPPP AAG PL +G PP G Q P +
Sbjct: 337 PPPPPPPRSN----AAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 705 TXXXAXXXPXXXPL-LXLXXKPXXXPTPXXXPXXCXPXSP 821
P PL PTP P P P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 501 STXPXXPPXPPPPPPPXXXXSPPAAGXXP 587
S P PP PP PP PAA P
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = +3
Query: 486 NXXXTSTXPXXPPXPPPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXPXXPLGDQTP 659
N TST P P PP PP PP+A L G PP P P+ P
Sbjct: 408 NASRTSTPPV--PTPPSLPPSAPPSLPPSA-PPSLPMGAPAAPP--LPPSAPIAPPLP 460
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 529 PPPPPPPXXXXPXXPRDXPX**GVTWAPPPXP 624
PPPPPPP P + PPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 501 STXPXXPPXPPPPPPPXXXXSPPAAGXXPLVRGYLGXPP 617
S P P PPPPP PP+A P+ G PP
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSA--PPMPAGPPSAPP 1732
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +1
Query: 499 PVPXPXXXPPP---PPPPPPXXXXPXXPRDXPX**GVTWAPPP 618
PV PP P PPPP P P P G APPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 510 PXXPPX--PPPPPPPXXXXSPPAAGXXPL 590
P PP PPPP P PP+A PL
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 505 PXPXXXPPPPPPPPPXXXXPXXP 573
P P P PPPP P P P
Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVP 1744
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.70
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 523 PPPPPPPPP 549
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 519 PPXPPPPPP 545
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 522 PXPPPPPPP 548
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.70
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 523 PPPPPPPPP 549
PPPPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 502 VPXPXXXPPPPPPPP 546
+P PPPPPPPP
Sbjct: 183 LPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 511 PXXXPPPPPPPPP 549
P PPPPPPPP
Sbjct: 184 PSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 505 PXPXXXPPPPPPPPP 549
P P PPPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 529 PPPPPPPXXXXPXXPRDXP 585
PPPPPPP P+ P
Sbjct: 370 PPPPPPPPELLNHSPKSRP 388
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 523 PPPPPPPP 546
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 526 PPPPPPPP 549
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 522 PXPPPPPPPXXXXSP 566
P PPPPPP SP
Sbjct: 370 PPPPPPPPELLNHSP 384
Score = 24.2 bits (50), Expect(2) = 0.79
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 528 PPPPPPPXXXXSPP 569
PPPPPPP P
Sbjct: 371 PPPPPPPELLNHSP 384
Score = 23.4 bits (48), Expect(2) = 0.79
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 519 PPXPPPPP 542
PP PPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 29.1 bits (62), Expect = 0.92
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 502 VPXPXXXPPPPPPPP 546
V P PPPPPPPP
Sbjct: 1088 VSKPSAVPPPPPPPP 1102
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 526 PPPPPPPP 549
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 493 VXPVPXPXXXPPPPPPPPPXXXXPXXPRDXPX**GVTWAPP-PXP 624
+ PVP P PP PPP P P + APP P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPPPXXXXPXXPRDXPX**GVTWAPPPXP 624
PVP P PP PPP P P T PP P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPP---PPXXXXPXXPRDXPX**GVTWAPPPXP 624
PVP P PP P P PP P G APPP P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 493 VXPVPXPXXXPPPPPPPPPXXXXPXXPRDXPX**GVTWAPPPXP 624
+ PVP P PP P P P P + A PP P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.1
Identities = 29/109 (26%), Positives = 33/109 (30%), Gaps = 4/109 (3%)
Frame = +2
Query: 584 PXSEGLPGXPPXXXXPLXAPWGPNPXLTIAXXXNXPXXRXXXXXRXXPSXRXPS----FX 751
P S P P P AP P L++ P + PS PS F
Sbjct: 429 PASSAAPSNPAPWQQPA-APQSA-PALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFI 486
Query: 752 PRX*TPXXPHTHXPPPXMXPXLPGGRXWXGFXPXXXXXPPPPPRXXTXP 898
P P P T PP P +PG G PP P P
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPPIPGA---PGMPNLNMSQPPMVPPGMALP 532
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 616 GGXPR*PLTXGXXPAAGGDXXXXGGGG--GGGXGGXXG 509
GG P P G GG+ GG G GGG GG G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 584 GXSRGXXGXXXXGGGGGGGGGXXXGXGTG 498
G SRG G GG GGG G G G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 584 GXSRGXXGXXXXGGGGGGGGGXXXGXGTG 498
G SRG G GG GGG G G G
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 499 PVPXPXXXPPPPPPPP 546
P+ PPPPPP P
Sbjct: 232 PIFSSSSTPPPPPPRP 247
Score = 22.2 bits (45), Expect(2) = 3.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 532 PPPPPPXXXXP 564
PPPPPP P
Sbjct: 240 PPPPPPRPSQP 250
>SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 257 LAIPLTRQAAHALPMSVEMFLFNLI 183
+AI L A H LPM V FL++L+
Sbjct: 392 VAIHLVLDAVHKLPMQVYFFLYSLM 416
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +3
Query: 510 PXXPPXPPPPPPPXXXXSP-PAAGXXP 587
P P PPPPP SP PAA P
Sbjct: 283 PGGAPLVPPPPPGMVMASPSPAAATIP 309
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 115 IYFKKYSRNCHTRPKQH----NRYIYCIKLNKNISTDMGNAC 228
IYFKKY +C H I +KLN+NI D G+ C
Sbjct: 504 IYFKKYDADCLPMTFIHIATSAARIILVKLNENIPED-GDVC 544
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 531 PPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXPXXPL 644
PPPPPP P A+ P ++ P P P+
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPV 243
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 234 LSCQWDS*SRSMDWKRFMVIXSTWIXDC 317
L C + + S++ WK V+ WI DC
Sbjct: 106 LVCSFLTPSKARQWKHQKVVKPEWIVDC 133
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 510 PXXPPXPPPPPPPXXXXSPPA 572
P PP PPPP P + PA
Sbjct: 62 PETPPSLPPPPSPGILATSPA 82
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 528 PPPPPPPXXXXSPPAAGXXPLVRG 599
P PPPPP AA PL+ G
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPLMTG 26
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 523 PPPPPPPPPXXXXPXXP 573
PPPPP P P P P
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 510 PXXPPXPPPPPPPXXXXSPP 569
P PP PP P P +PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 100 YNSECIYFKKYSRNCHTRPKQHNRYIYCIKLNKNI 204
+N + + +Y+++C R K+ +YC+K K++
Sbjct: 75 WNWQNLGISRYTKDCDFRSKKQKTIMYCLKGLKHL 109
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 8.6
Identities = 22/95 (23%), Positives = 27/95 (28%), Gaps = 2/95 (2%)
Frame = +3
Query: 519 PPXPPPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXPXXPLGDQTPXXQLXXEXTXLXX 698
PP P P PPAA P V P P P Q P + E +
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQ 576
Query: 699 XXTXXXAXXXP--XXXPLLXLXXKPXXXPTPXXXP 797
A P P+ + + P P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +2
Query: 791 PPPXMXPXLPGGRXWXGFXPXXXXXPPPPPRXXTXP 898
P P + P P W + PPPP + P
Sbjct: 99 PQPRLYPSAPLNYYWPSYQSVPSAAPPPPSQQRYMP 134
>SPAC630.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +3
Query: 519 PPXPPPPPPPXXXXSPPAAGXXPLVRGYLGXPPXTXXPXXPLGDQ 653
P PPPP + G P V G + PP P D+
Sbjct: 121 PTTSTPPPPAIFDENGEFVGDVPSVAGAIERPPSYESLPAPQNDE 165
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,833,803
Number of Sequences: 5004
Number of extensions: 52209
Number of successful extensions: 563
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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