Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I20
(968 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 36 0.057
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.076
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 34 0.13
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.17
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.17
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.17
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.53
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.53
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 32 0.71
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 31 1.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.6
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.2
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 2.8
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 30 2.8
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 2.8
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 30 2.8
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.6
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 6.6
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 6.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 6.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 6.6
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 6.6
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 6.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.7
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 28 8.7
AC084153-9|AAK84592.1| 90|Caenorhabditis elegans Hypothetical ... 28 8.7
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 37.1 bits (82), Expect = 0.019
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 266 PXLRGXXWAXPXPPXPXPPXXPPPP 340
P +RG W P PP PP PPPP
Sbjct: 110 PWMRGPWWRRPPPPWGPPPPGPPPP 134
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 35.5 bits (78), Expect = 0.057
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP PPPPP P
Sbjct: 355 PAPPPPPPPPPPPPPPQTP 373
Score = 32.7 bits (71), Expect = 0.40
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP P PP PPPPP P
Sbjct: 354 PPAPPPPPPPPPPPPPP 370
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPP 343
P P P PP PPPPP
Sbjct: 354 PPAPPPPPPPPPPPPP 369
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 290 AXPXPPXPXPPXXPPPPPXA 349
A P PP P PP PP P A
Sbjct: 356 APPPPPPPPPPPPPPQTPSA 375
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP PP PPPPP P
Sbjct: 349 PPIISPPAPPPPPPPPP 365
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.076
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP PPPPP P
Sbjct: 64 PPPPPPPPPMCPPPPPPMP 82
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP PP PPPPP P
Sbjct: 57 PPPPMCPPPPPPPPPPMCP 75
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXA 349
P PP P PP PPPPP A
Sbjct: 2 PPPPPPPPPPPPPPPPAA 19
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP PPP AP
Sbjct: 4 PPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 305 PXPXPPXXPPPPPXAP 352
P P PP PPPPP P
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXA 349
P PP P PP PPPPP A
Sbjct: 2 PPPPPPPPPPPPPPPPAA 19
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP PPP AP
Sbjct: 4 PPPPPPPPPPPPPPAASAP 22
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 305 PXPXPPXXPPPPPXAP 352
P P PP PPPPP P
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP P P G P P + G P PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 329 PPPPP 343
PPPPP
Sbjct: 773 PPPPP 777
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 155 PPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXXPP 334
PPP G P P + G P P P PP P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 335 PPPXAP 352
PPP P
Sbjct: 771 PPPPPP 776
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP G P P + G P P G P PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKG 782
Query: 329 PPPPPXAP 352
PPPP P
Sbjct: 783 GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP P P G P P + G P PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 329 PPPPP 343
PPPPP
Sbjct: 773 PPPPP 777
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 155 PPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXXPP 334
PPP G P P + G P P P PP P P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 335 PPPXAP 352
PPP P
Sbjct: 771 PPPPPP 776
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP G P P + G P P G P PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKG 782
Query: 329 PPPPPXAP 352
PPPP P
Sbjct: 783 GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP P P G P P + G P PP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 329 PPPPP 343
PPPPP
Sbjct: 356 PPPPP 360
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 155 PPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXXPP 334
PPP G P P + G P P P PP P P PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 335 PPPXAP 352
PPP P
Sbjct: 354 PPPPPP 359
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP G P P + G P P G P PP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP-----PPPPPGGCPPPPPPPPPGGFKG 365
Query: 329 PPPPPXAP 352
PPPP P
Sbjct: 366 GPPPPPPP 373
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P P PPPPP P
Sbjct: 111 PPPPAPAAPCCPPPPPPTP 129
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.53
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP P PP PPPPP P
Sbjct: 133 PPPPPPPHYPPPPPHYP 149
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP + A P+P + P ++ P P P P PP
Sbjct: 95 PAPPPAPYPQH-AVPAPAPPPAPYPQHAVPAPAPYQQQPPP------PPPPPHYPPPPPH 147
Query: 329 PPPPPXAP 352
PPPP AP
Sbjct: 148 YPPPPPAP 155
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 31.9 bits (69), Expect = 0.71
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 275 RGXXWAXPXPPXPXPPXXPPPPP 343
+G + PP P PP PPPPP
Sbjct: 126 QGPQYIEAPPPPPSPPPPPPPPP 148
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 290 AXPXPPXPXPPXXPPPP 340
A P PP P PP PPPP
Sbjct: 133 APPPPPSPPPPPPPPPP 149
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 8/76 (10%)
Frame = -3
Query: 351 GAXGGGGGXXGGXGXGGXGXAXXXPLNXGVVXRKKXGXPXPXF--------XTXKXFXPG 196
G GGGG GG G GG G G P P F T + F G
Sbjct: 482 GGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDFGGDTAAAGPTEEEFFTG 541
Query: 195 EGXAXXFXXPXGGGXG 148
E P G G G
Sbjct: 542 ESALSRSKGPTGDGYG 557
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPXX 328
P PPP + P P + G P P + A P PP P P
Sbjct: 533 PAPPPVS-----SIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLG 587
Query: 329 PPPPPXAP 352
PPPP P
Sbjct: 588 GPPPPPPP 595
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 351 GAXGGGGGXXGGXGXGGXGXAXXXPLN 271
G GGG G GG G GG G + P N
Sbjct: 829 GGYGGGYGGGGGGGGGGGGGSYHQPYN 855
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P P PP PPPPP AP
Sbjct: 134 PPPTPAAPPPPPPPPPPAP 152
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +2
Query: 149 PXPPPXGXXKXXAXPS-PGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPX 325
P PPP + P P N K G + G P PP P
Sbjct: 74 PPPPPKPCCQPAFGPCCPATPNCCPKPCCRGRRPEYEEYEDE-EGNPGGVPAPPNPPRTC 132
Query: 326 XPPPPPXAP 352
PPP P AP
Sbjct: 133 CPPPTPAAP 141
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPP 340
P PP P PP PPPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPP 340
P PP P PP PPPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 260 TTPXLRGXXWAXPXPPXPXPPXXPPPP 340
TT + +A P PP P P PPPP
Sbjct: 772 TTTTIPPPFFALPVPPPPPVPPPPPPP 798
>Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical
protein R06C7.1 protein.
Length = 945
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP P PP AP
Sbjct: 3 PHPPQPHPPMPPMPPVTAP 21
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 278 GXXWAXPXPPXPXPPXXPPPPPXAP 352
G ++ P P PP PPPP AP
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAP 316
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 278 GXXWAXPXPPXPXPPXXPPPPPXAP 352
G ++ P P PP PPPP AP
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAP 316
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P P P PP PPPP AP
Sbjct: 316 PSIPPPRPPALAPPPPVAP 334
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 248 FFRXTTPXLRGXXWAXPXPPXPXPPXXPPPPPXAP 352
F +T R +A P PP P PP PP AP
Sbjct: 3 FSEASTSGDRVNGFAKPFPPKPREGAPPPAPPLAP 37
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P P P PP PPPP AP
Sbjct: 316 PSIPPPRPPALAPPPPVAP 334
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PP P PP AP
Sbjct: 3 PHPPQPHPPMPPMPPVTAP 21
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP P P PPPPP P
Sbjct: 243 PPPPSPVCMPPPPPPCP 259
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPP 343
P PP P P PPPPP
Sbjct: 254 PPPPCPMPIPCPPPPP 269
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 242 PXFFRXTTPXLRGXXWAXPXPPXPXPPXXPPPPP 343
P F T P + G A P P PP P PPP
Sbjct: 107 PSFSPATQPSMNGHH-APPPPAVSRPPAFPTPPP 139
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -3
Query: 351 GAXGGGGGXXGGXGXGGXGXAXXXPLNXGVVXRKKXGXPXPXFXTXKXFXPGEGXAXXFX 172
G GGGGG G G GG G G G P P K PG+ A
Sbjct: 85 GGAGGGGGY-GAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNP 143
Query: 171 XPXGGG 154
G G
Sbjct: 144 GASGKG 149
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPP 343
P PP P P PPPPP
Sbjct: 72 PPPPPPPMPCPPPPPP 87
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP P P PPPPP P
Sbjct: 73 PPPPPPMPCPPPPPPMP 89
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 296 PXPPXPXPP---XXPPPPPXAP 352
P PP P PP PPPPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Frame = +2
Query: 296 PXPPXPXPP---XXPPPPPXAP 352
P PP P PP PPPPP P
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPP 815
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +2
Query: 290 AXPXPPXPXPP--XXPPPPP 343
A P PP P PP PPPPP
Sbjct: 83 APPPPPPPPPPTLKAPPPPP 102
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +2
Query: 149 PXPPPXGXX-KXXAXPSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXPPX 325
P PPP G + PG G P F P G PP P PP
Sbjct: 669 PHPPPMGFPFQHQLTQLPGQPR--PAGLPPGVPPMFNLNAPPPPGIPG---YPPAPPPPG 723
Query: 326 XPPPPP 343
PPPP
Sbjct: 724 VGPPPP 729
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PPPPP P
Sbjct: 494 PLPPIATPSSVPPPPPPPP 512
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PPPPP P
Sbjct: 296 PIPPPPIKEESPPPPPPPP 314
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PPPPP P
Sbjct: 296 PIPPPPIKEESPPPPPPPP 314
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P PPPPP P
Sbjct: 501 PLPPIATPSSVPPPPPPPP 519
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P P PPP P +P
Sbjct: 91 PPPPPPKPTIRPPPIPASP 109
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P PP P P PPP P +P
Sbjct: 313 PPPPPPKPTIRPPPIPASP 331
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 290 AXPXP-PXPXPPXXPPPPPXAP 352
A P P P PP PPPPP P
Sbjct: 781 APPSPLTAPIPPPPPPPPPMLP 802
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 290 AXPXP-PXPXPPXXPPPPPXAP 352
A P P P PP PPPPP P
Sbjct: 680 APPSPLTAPIPPPPPPPPPMLP 701
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/71 (26%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Frame = +2
Query: 149 PXPPPXGXXKXXAX---PSPGXXNFXVKKXGXGXPXFFRXTTPXLRGXXWAXPXPPXPXP 319
P PPP A P P P P G P PP
Sbjct: 488 PPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMA 547
Query: 320 PXXPPPPPXAP 352
PPPPP P
Sbjct: 548 NGGPPPPPPLP 558
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 296 PXPPXPXPPXXPPPPPXAP 352
P P PP PPPPP P
Sbjct: 39 PRPRVAAPPFAPPPPPSPP 57
>AC084153-9|AAK84592.1| 90|Caenorhabditis elegans Hypothetical
protein Y22D7AL.3 protein.
Length = 90
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 302 PPXPXPPXXPPPPPXAP 352
PP P P PPPPP P
Sbjct: 5 PPDPNFPNFPPPPPPKP 21
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +2
Query: 251 FRXTTPXLRGXXWAXPXPPXPXP--PXXPPPPP 343
F P + G P PP P P PPPPP
Sbjct: 184 FGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,200,236
Number of Sequences: 27780
Number of extensions: 81436
Number of successful extensions: 2098
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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