Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I19
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 162 5e-41
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 152 7e-38
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 2e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 132 8e-32
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 114 2e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 63 4e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 59 9e-10
SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 27 2.5
SPCC1795.10c |||Sed5 Vesicle Protein Svp26 |Schizosaccharomyces ... 26 5.8
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 7.6
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 162 bits (394), Expect = 5e-41
Identities = 90/176 (51%), Positives = 106/176 (60%)
Frame = +2
Query: 296 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 475
GTVIGIDLGTTYSCV V KNGRVEIIANDQGNRITPSYVAFT+D ERL+G+AAKNQ +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTED-ERLVGEAAKNQAPSN 93
Query: 476 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSSTNFTRXTXXXXXXXXXX 655
PENT+FD KRLIGR++ ++T+ D+K FPF ++ N
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFH-IVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 656 XXXXXXXXXXXXXXGKXVTHAVVTVPALFQ*CXTXXPPXMLVXFLGLNVMXIINDP 823
GK VTHAVVTVPA F GLNV+ I+N+P
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKD-AGTIAGLNVIRIVNEP 207
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +1
Query: 625 KVFAPEXISAMVLTKMXETAEAYLGKXGYSCCCYCACLISMMXNXQXTXDAGTXSG 792
K F PE ISAM+L+KM +TAEAYLGK + Q T DAGT +G
Sbjct: 143 KKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFN-DAQRQATKDAGTIAG 197
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 152 bits (368), Expect = 7e-38
Identities = 89/173 (51%), Positives = 101/173 (58%)
Frame = +2
Query: 305 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 484
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 485 TVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSSTNFTRXTXXXXXXXXXXXXX 664
T+FDAKRLIGR ++D VQ D+K +PFK K+ + F T
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGK-PLIQVEFKGETKTFTPEEISSMVL 122
Query: 665 XXXXXXXXXXXGKXVTHAVVTVPALFQ*CXTXXPPXMLVXFLGLNVMXIINDP 823
G VT AVVTVPA F + GLNV+ IIN+P
Sbjct: 123 LKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGL-IAGLNVLRIINEP 174
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (365), Expect = 2e-37
Identities = 88/173 (50%), Positives = 101/173 (58%)
Frame = +2
Query: 305 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 484
IGIDLGTTYSCVG + N RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 485 TVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSSTNFTRXTXXXXXXXXXXXXX 664
T+FDAKRLIGR++ D VQ D+K +PFK K+ + + T
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGK-PVLQVEYKGETKTFTPEEISSMVL 122
Query: 665 XXXXXXXXXXXGKXVTHAVVTVPALFQ*CXTXXPPXMLVXFLGLNVMXIINDP 823
G VT AVVTVPA F + GLNV+ IIN+P
Sbjct: 123 MKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGL-IAGLNVLRIINEP 174
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 625 KVFAPEXISAMVLTKMXETAEAYLG 699
K F PE IS+MVL KM ETAEAYLG
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLG 134
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 132 bits (318), Expect = 8e-32
Identities = 78/173 (45%), Positives = 90/173 (52%)
Frame = +2
Query: 305 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 484
IGIDLGTTYSCV V++ VEII NDQG R TPS+VAFT+ ERL+GDAAKNQ NP N
Sbjct: 9 IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTET-ERLVGDAAKNQAAMNPRN 67
Query: 485 TVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSSTNFTRXTXXXXXXXXXXXXX 664
TVFDAKRLIGR + D Q D+K +PFK N+
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVI-DNNGIPTIEVNYLGEKKQFTAQEISAMVL 126
Query: 665 XXXXXXXXXXXGKXVTHAVVTVPALFQ*CXTXXPPXMLVXFLGLNVMXIINDP 823
K V AV+TVPA F GLNV+ IIN+P
Sbjct: 127 TKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKD-AGAIAGLNVLRIINEP 178
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 625 KVFAPEXISAMVLTKMXETAEAYLGK 702
K F + ISAMVLTKM E +EA L K
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNK 139
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 114 bits (274), Expect = 2e-26
Identities = 69/176 (39%), Positives = 88/176 (50%)
Frame = +2
Query: 296 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 475
G VIGIDLGTT SC+ + + ++IAN +G R TPS VAFT+DGERL+G +AK Q N
Sbjct: 50 GPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVIN 109
Query: 476 PENTVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSSTNFTRXTXXXXXXXXXX 655
PENT F KRLIGR + + VQ D+K P+ K + S
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPY----KIVEHSNGDAWLEARGKTYSPSQIGG 165
Query: 656 XXXXXXXXXXXXXXGKXVTHAVVTVPALFQ*CXTXXPPXMLVXFLGLNVMXIINDP 823
GK V +AVVTVPA F GLNV+ ++N+P
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFN-DSQRQATKAAGAIAGLNVLRVVNEP 220
Score = 33.5 bits (73), Expect = 0.038
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 610 LHKXDKVFAPEXISAMVLTKMXETAEAYLGK 702
L K ++P I +L+KM ETA YLGK
Sbjct: 151 LEARGKTYSPSQIGGFILSKMRETASTYLGK 181
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = +2
Query: 302 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 481
V+GID G + + + V +N +++I N+ NR TPS V++ + R +G+AAK+ +N
Sbjct: 7 VVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSY-GERSRFLGEAAKSAEASNFR 65
Query: 482 NTVFDAKRLIGREWSDQTVQ 541
NTV KRL GR + D ++
Sbjct: 66 NTVGSLKRLAGRTYDDPEIK 85
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.8 bits (136), Expect = 9e-10
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 299 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 478
TVIGI G S + ++G+ +++AN++GNR PS +++ D E G A+ QL N
Sbjct: 25 TVIGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 479 ENTVFDAKRLIGREWSDQTVQH 544
+N+V + + L+G+ + T+ H
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHH 105
>SPBC342.06c |rtt109|kat11|RTT109 family histone lysine
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 369
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 152 IFTATIRSRLKCFYQTLAYSNSTPDTFRSNCSRKTRNLKEFRYSEMVIE 6
++ T + LK + +L+ + S+ + F SN +NLK+F Y ++
Sbjct: 288 LYRVTYDTLLKHPFGSLSDAQSSTEKFLSNTLSAVQNLKDFHYKRYKLD 336
>SPCC1795.10c |||Sed5 Vesicle Protein Svp26 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 95 SNSTPDTFRSNCSRKTRNLKEFRYSEMVI 9
S+S+PD + S SR+T N+ Y ++ I
Sbjct: 179 SSSSPDAYSSGSSRRTSNVLRQAYKKLGI 207
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 452 AKNQLTT-NP-ENTVFDAKRLIGREWSDQTVQHDVKFFPFKGR*KEQQTSCSST 607
+KN T+ +P ++T+ + +R + E + +HDVK+ P+KG+ K S +T
Sbjct: 105 SKNHETSLSPSKSTIDNNERKLDNEIDNY--KHDVKYSPYKGQGKTSNPSQGTT 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,009,656
Number of Sequences: 5004
Number of extensions: 57483
Number of successful extensions: 159
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -