Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I18
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.032
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.056
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.056
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.074
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.91
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 3.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.4
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 575 YPMS*XPPRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
+P+S P R P S P PP P +PP + P PP PPP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSA-PTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 637 PPPXLXXPXXSPHNPLXPXPPXPPXXPPPPXP 732
PPP + P P P P P PP PPPP P
Sbjct: 1708 PPPPMSVPPP-PSAP--PMPAGPPSAPPPPLP 1736
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 638 PPPPXPXXXLPPTIPSXPXRXXPPPXPPPLXRGXXRXXXPP 760
P P PT P P PPP PP+ G PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.39
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXXLPPTIPSXP 691
P S P PP P LPP +P+ P
Sbjct: 1470 PAPSSAPAPPAPVSQLPPAVPNVP 1493
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +2
Query: 566 PXXYPMS*XPPRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXP 718
P P S PP+ S P PPP +P PS P PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP----PPPLP 1736
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 630 PXSPPXPXPPXXFPPQSPXPHXAXXPXXXPPP 725
P PP PP PP +P P A P PPP
Sbjct: 1707 PPPPPMSVPP---PPSAP-PMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Frame = +2
Query: 638 PPPPXPXXXLP-------PTIPSXPXRXXPPPXPPPLXRGXXRXXXPPSTP 769
PPPP P +P P P P PPP PPP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.097
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Frame = +2
Query: 593 PPRXSXXXFPXXSXLP-PPPXPXXXLPPTIPSXPX-----RXXPPPXPPPLXRGXXRXXX 754
PP P + +P PPP P PP P P PPP PP + G R
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYA 794
Query: 755 P 757
P
Sbjct: 795 P 795
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.056
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 566 PXXYPMS*XPPRXSXXXFPXXSXLPPPPXPXXXL--PPTIPSXPXRXXP-PPXPPP 724
P P S PP S P S LPPP P + PP+ PS P P PP PP
Sbjct: 150 PPPSPAS-APPIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +1
Query: 637 PPPXLXXPXXSPHN-PLXPX--PPXPPXXPPPP 726
PP P SP + P P PP PP PPPP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 578 PMS*XPPRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXP-PPLXRGXXRXXX 754
P + PP P S P P P P + P P + P P PP +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPS-PASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 755 PPSTPIXXRCXP 790
PPS P P
Sbjct: 184 PPSAPSLPSAVP 195
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.056
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 638 PPPPXPXXXLPPTIPSXPXRXXPPPXPPPLXRGXXRXXXPP 760
PPPP P +IP P PP PPP PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPPLXRG-XXRXXXPPSTPI 772
P S P P PP++P PP PP L G PPS PI
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI 455
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Frame = +2
Query: 638 PPPPXPXXX---LPPTIPSXPXRXXPPPXPPPLXRGXXRXXXPP 760
PPPP P PP PPP PPP PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 593 PPRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPPLXRG-XXRXXXPPSTP 769
PP + P + PP LP P+ P P PPL G PP+ P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +2
Query: 566 PXXYPMS*XPPRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPPLXRGXXR 745
P P S P R P +PPP PP P P P P +
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP--IAPVSMNPAINSTSKP 290
Query: 746 XXXPPSTPI 772
PPS+ +
Sbjct: 291 PLPPPSSRV 299
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXX-----LPPTIPSXPXRXXPPPXPPPLXRGXXRXXXPP 760
P PPPP P PP + S PP PPP G PP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSS-RAVSNPPAPPPAIPGRSAPALPP 405
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P LPP LP +P+ P P PPP
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P PP P PP P+ P PPP P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPA---PPPAPAP 482
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.7 bits (71), Expect = 0.074
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 744 RQXPRXRGGGXGGGXXRXGXEGIVGGXXXXGKGGGGXXEXXGKXXXXXRGG 592
R P RGG G R G G GG G GGG G RGG
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +1
Query: 670 PHNPLXPXPPX---PPXXPPPPXP 732
P NP P PP PP PPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 630 PXSPPXPXPPXXF-PPQSPXP 689
P +PP P PP F PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 638 PPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
PPPP P PP+ PPP PPP
Sbjct: 10 PPPPPPPGFEPPS--------QPPPPPPP 30
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXXLP--PTIPSXPXRXXPPPXPPPL 727
P LP P P LP P +P P P P PPL
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPL 141
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXP 718
P P S PP P P LPP +P + P P P
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPP-VPVPTAKAPPVPAP 1242
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 637 PPPXLXXPXXSPHNPLXPXPPXPPXXPPPPXP 732
PPP P +P L P P PP P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Frame = +2
Query: 629 SXLPPPPXPXXXLPPTIPSXPXRXXP------PPXPPP 724
S +PP P P +PP P P PP PPP
Sbjct: 1176 SGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P P S PP P P P S PPP P P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXP 718
P P S PP P P +PP P P P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPP--PSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPT------IPSXP-XRXXPPPXPPP 724
P + P S PP P P PP IP P PP PPP
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P + P S PP P P PP P PP P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPV----PVPSGAPPVPKP 1145
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 596 PRXSXXXFPXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P + P S PP P P PP P PP P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPV----PAPSGAPPVPKP 1164
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 694 PPXPPXXPPPPXPRXLXXXXXXLNXH 771
P PP PPPP P L L H
Sbjct: 62 PETPPSLPPPPSPGILATSPAVLQKH 87
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 620 PXXSXLPPPPXPXXXLPPTIPSXPXRXXPPPXPPP 724
P PPP S P PPP PPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 637 PPPXLXXPXXSPHNPLXPXPPXPPXXPPPP 726
PPP P + P PP PPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 726 RGGGXGGGXXRXGXEGIVGGXXXXGKGGGGXXEXXGK-XXXXXRGG 592
RGG GG G G GG +GGG G+ RGG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 726 RGGGXGGGXXRXGXEGIVGGXXXXGKGGGGXXEXXGK 616
RGGG GG G G G GG G + K
Sbjct: 36 RGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 736 TSXEGGGXXXGXXAXWGXGDCGGKXXGGXGXGGEXGXXR 620
T GGG G G G GG+ G G G G R
Sbjct: 442 TPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGAR 480
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,723,964
Number of Sequences: 5004
Number of extensions: 22832
Number of successful extensions: 312
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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