Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I15
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 51 1e-06
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.62
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.62
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.62
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.5
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.8
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.6
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 50.8 bits (116), Expect = 1e-06
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Frame = +2
Query: 116 MKIYKDIITG**DVL*HLQNEIGSMKVI----YESDGXVG*REHRGDIQIEGFXSFG*RG 283
M IYKDI T D L ++ MK++ YE G R+ G+I + G G
Sbjct: 1 MLIYKDIFTD--D---ELSSDSFPMKLVDDLVYEFKGKHVVRKE-GEIVLAGSNPSAEEG 54
Query: 284 LTR-GTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMXXXXXXXXXXXPDQ--VX 454
G+D VE G+DIVLNH+LVE + D + Y+K +M D+ V
Sbjct: 55 AEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVD 114
Query: 455 VFKXXMNKVMKDILG--RFXELQFFTG 529
FK + + +L RF L FF G
Sbjct: 115 AFKKKIQGWVVSLLAKDRFKNLAFFIG 141
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 546 DGXVAMMEYXXFDGTXXPIMMFFKPGLXXE 635
+G VA++EY DGT P +M K + E
Sbjct: 150 NGQVAIIEYRDVDGTEVPTLMLVKEAIIEE 179
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = +2
Query: 680 GRPGXLGLPIX*SIPVRIPAXNRXSPXXHG*PIFVFPXTLPGFPPIXXT*PPXXPPPXPX 859
G P GLP P P P G P P G PPI PP PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 860 XXPPP 874
PPP
Sbjct: 769 PPPPP 773
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +2
Query: 773 PIFVFPXTLPGFPPIXXT*PPXXPPPXPXXXPP 871
PI P PG PPI PP PPP P PP
Sbjct: 708 PITGGPPPPPGLPPITGG-PP--PPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = +2
Query: 680 GRPGXLGLPIX*SIPVRIPAXNRXSPXXHG*PIFVFPXTLPGFPPIXXT*PPXXPPPXPX 859
G P GLP P P P G P P G PPI PP PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 860 XXPPP 874
PPP
Sbjct: 769 PPPPP 773
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +2
Query: 773 PIFVFPXTLPGFPPIXXT*PPXXPPPXPXXXPP 871
PI P PG PPI PP PPP P PP
Sbjct: 708 PITGGPPPPPGLPPITGG-PP--PPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = +2
Query: 680 GRPGXLGLPIX*SIPVRIPAXNRXSPXXHG*PIFVFPXTLPGFPPIXXT*PPXXPPPXPX 859
G P GLP P P P G P P G PPI PP PPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGC 351
Query: 860 XXPPP 874
PPP
Sbjct: 352 PPPPP 356
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +2
Query: 773 PIFVFPXTLPGFPPIXXT*PPXXPPPXPXXXPP 871
PI P PG PPI PP PPP P PP
Sbjct: 291 PITGGPPPPPGLPPITGG-PP--PPPPPGGLPP 320
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P + PPI P PPP P PPP
Sbjct: 342 PVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P P F P PP PPP P PPP
Sbjct: 49 PICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical
protein F12A10.1 protein.
Length = 120
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -3
Query: 873 GGGXXXGXGGGXXGG*VXXIGGKPGRVXGNTKMGXPWXXGEXRFXAGMRTG 721
GGG G GGG GG GG PG G MG + + R+G
Sbjct: 60 GGGYPGGYGGGYPGGYSGYGGGYPGMYGGG--MGGSYGSSSWGSYSSSRSG 108
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 773 PIFVFPXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P+F P P P PP PPP P PPP
Sbjct: 201 PMFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPP 234
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +2
Query: 671 FQXGRPGXLGLPIX*SIPVRIPAXNRXSPXXHG*PIFVFPXTLPG-FPPIXXT*PPXXPP 847
+ GR G G P P R+P P P+ P P F P PP PP
Sbjct: 20 YPFGRGGCGGCPTPMCQP-RMPCA-APMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPP 77
Query: 848 PXPXXXPPP 874
P P PPP
Sbjct: 78 PMPCPPPPP 86
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 722 PVRIPAXNRXSPXXHG*PIFVFPXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P RIP SP + P P PPI P PPP P PPP
Sbjct: 477 PSRIP---NPSPSPQPAEVSKSPPPPPPLPPIAT--PSSVPPPPPPPPPPP 522
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P L G PP PP PPP PPP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 788 PXTLPGFPPIXXT*PPXXPPPXPXXXPP 871
P +PG+PP PP PP P PP
Sbjct: 709 PPGIPGYPPAPP--PPGVGPPPPQGIPP 734
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 788 PXTLPGFPPIXXT*PPXXPPPXPXXXPPP 874
P P P I P PPP P PPP
Sbjct: 945 PPVPPPIPAIRHRTPSPPPPPLPSSTPPP 973
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 788 PXTLP-GFPPIXXT*PPXXPPPXPXXXPPP 874
P LP PP T PP PPP P PPP
Sbjct: 77 PPPLPLSNPPAKPTPPP--PPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 788 PXTLP-GFPPIXXT*PPXXPPPXPXXXPPP 874
P LP PP T PP PPP P PPP
Sbjct: 299 PPPLPLSNPPAKPTPPP--PPPKPTIRPPP 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,686,683
Number of Sequences: 27780
Number of extensions: 342709
Number of successful extensions: 2148
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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