Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I14
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312...    86   3e-17

>08_01_0355 -
           3122374-3122520,3122912-3123047,3123124-3123221,
           3123724-3123801,3123876-3123945,3124452-3124516,
           3124606-3124686,3124822-3124926,3125002-3125085,
           3125175-3125250,3125358-3125436,3125526-3125646,
           3125768-3125827
          Length = 399

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
 Frame = +1

Query: 199 VADTGDFEAXKEYKPTDATTNPSLILSAAGME--QYQHILDKAIKYGXDNG-SSIEEXVA 369
           V DT  F+  +++ PT AT + SL+L  AG+   +++  +D A+  G  N     E+ ++
Sbjct: 76  VPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGECNTMEKPEDRMS 135

Query: 370 XTLDMLSVLFGCEILQIIPGRVSVXVDAXXSFDKDASIAKAIKFIXLFAEHGXKXXRLLI 549
             L       G E+  ++PGRVS  +DA  ++D    I +  + + L+++H     RLL 
Sbjct: 136 CFLTKALANVGAEMAHLVPGRVSTEIDARLAYDTQGIIQRVHELLKLYSDHDVLSERLLF 195

Query: 550 TLASTWXGXQAAKELEKTHGIXXXLTLLFXLYQAIACAXAHVTLI 684
            + +TW G +A++ LE + GI   LT ++   QA A A A  +++
Sbjct: 196 KIPATWQGIEASRLLE-SEGIQTHLTFVYSFAQAAAAAQAGASVV 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,245,746
Number of Sequences: 37544
Number of extensions: 291159
Number of successful extensions: 527
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)