Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I14
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   180   2e-45
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...    33   0.20 
Z69664-1|CAA93514.1|  325|Caenorhabditis elegans Hypothetical pr...    29   5.7  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  180 bits (437), Expect = 2e-45
 Identities = 90/171 (52%), Positives = 116/171 (67%)
 Frame = +1

Query: 178 LNNIPLXVADTGDFEAXKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGXDNGSSIE 357
           L    + VADTGDF A KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y  ++ S  +
Sbjct: 7   LKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKEHASGHQ 66

Query: 358 EXVAXTLDMLSVLFGCEILQIIPGRVSVXVDAXXSFDKDASIAKAIKFIXLFAEHGXKXX 537
           E +   +D L V+FG EIL+ IPGRVS  VDA  SFD  ASI +A+  I  + + G    
Sbjct: 67  EVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEKEGISKD 126

Query: 538 RLLITLASTWXGXQAAKELEKTHGIXXXLTLLFXLYQAIACAXAHVTLISP 690
           R+LI LASTW G +AAK LE  HGI   +TLLF   QA+ACA + VTLISP
Sbjct: 127 RILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISP 177


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 622 LTLLFXLYQAIACAXAHVTLISP 690
           +TLLF   QA+ACA + VTLISP
Sbjct: 1   MTLLFNFEQAVACAESGVTLISP 23


>Z69664-1|CAA93514.1|  325|Caenorhabditis elegans Hypothetical
           protein K04D7.1 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 268 LILSAAGMEQYQHILDKAIK-YGXDNGSSIEEXVAXTLDMLSVLFGCEILQIIPG 429
           +++S+ G        DK ++ +  + G S  + ++ T D+LSV F  +  QI+ G
Sbjct: 75  VVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSG 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,560,944
Number of Sequences: 27780
Number of extensions: 258002
Number of successful extensions: 448
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)