Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I13
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 133 1e-31
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 132 3e-31
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 117 1e-26
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 105 3e-23
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 100 2e-21
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 90 2e-18
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 77 1e-14
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 33 0.28
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 30 2.0
12_01_0941 - 9316051-9316056,9316747-9317082 30 2.6
12_01_0937 - 9289999-9290046,9290123-9290458 30 2.6
07_03_1666 + 28482262-28482385,28482475-28482992 29 3.5
04_01_0279 + 3743025-3745169 29 3.5
12_01_0947 - 9396320-9396483,9396822-9397025,9397769-9398009,939... 29 4.6
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 29 4.6
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 28 8.0
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 133 bits (322), Expect = 1e-31
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +1
Query: 301 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS 480
+L +NG K+ + S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGAKKV+ISAPS
Sbjct: 202 TLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPS 261
Query: 481 ADAPMXVVGVNLXAYDPSFKVISNAS 558
ADAPM VVGVN +YDP V+SNAS
Sbjct: 262 ADAPMFVVGVNEKSYDPKMNVVSNAS 287
Score = 89.0 bits (211), Expect = 4e-18
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +3
Query: 117 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 293
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG FKGS++V
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 294 D 296
D
Sbjct: 199 D 199
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/79 (39%), Positives = 37/79 (46%)
Frame = +3
Query: 576 LPHLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSXKLWXDAPWCSTKHHSXPXLGAAQ 755
L LAKV+H+ F IVEGLM DGPS K W + ++ GAA+
Sbjct: 293 LAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRG-AAQNIIPSSTGAAK 351
Query: 756 XCGXXYPLPPNGTLTGMPF 812
G P NG LTGM F
Sbjct: 352 AVGKVLP-ELNGKLTGMAF 369
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 132 bits (319), Expect = 3e-31
Identities = 62/86 (72%), Positives = 73/86 (84%)
Frame = +1
Query: 301 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS 480
+L +NG KI+V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGA+KV+ISAPS
Sbjct: 143 TLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPS 202
Query: 481 ADAPMXVVGVNLXAYDPSFKVISNAS 558
ADAPM VVGVN Y+PS V+SNAS
Sbjct: 203 ADAPMFVVGVNEKNYNPSMNVVSNAS 228
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +3
Query: 117 SKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 293
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+FKYDSTHG FKG+++V
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 294 D 296
D
Sbjct: 140 D 140
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/79 (37%), Positives = 36/79 (45%)
Frame = +3
Query: 576 LPHLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSXKLWXDAPWCSTKHHSXPXLGAAQ 755
L LAK++H+ F I EGLM DGPS K W S ++ GAA+
Sbjct: 234 LAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAS-QNIIPSSTGAAK 292
Query: 756 XCGXXYPLPPNGTLTGMPF 812
G P NG LTGM F
Sbjct: 293 AVGKVLP-ALNGKLTGMAF 310
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 117 bits (281), Expect = 1e-26
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +1
Query: 301 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS 480
+LL ++ VF R+P+ IPWG+ GAE+VVESTGVFT DKA+AHL+GGAKKV+ISAPS
Sbjct: 116 TLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 175
Query: 481 ADAPMXVVGVNLXAYDPSFKVISNAS 558
DAPM VVGVN Y P ++SNAS
Sbjct: 176 KDAPMFVVGVNEKEYKPDIDIVSNAS 201
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +3
Query: 120 KIGINGFGRIGRLVLRASIEK-GAQVVAINDPFIGLDYMVYLF 245
KIGINGFGRIGRLV R +++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
Score = 45.2 bits (102), Expect = 7e-05
Identities = 32/79 (40%), Positives = 37/79 (46%)
Frame = +3
Query: 576 LPHLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSXKLWXDAPWCSTKHHSXPXLGAAQ 755
L LAKVI+D F IVEGLM DGPS K W ++ + GAA+
Sbjct: 207 LAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGR-AASFNIIPSSTGAAK 265
Query: 756 XCGXXYPLPPNGTLTGMPF 812
G P NG LTGM F
Sbjct: 266 AVGKVLP-ALNGKLTGMAF 283
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 105 bits (253), Expect = 3e-23
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +1
Query: 340 ERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMXVVGVNLX 519
ER+P IPW +AGAEYVVESTGVFT +KA+AHL+GGAKKV+ISAPS DAPM V GVN
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 520 AYDPSFKVISNAS 558
Y ++SNAS
Sbjct: 164 KYTSDIDIVSNAS 176
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 KIGINGFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQ 293
KIGINGFGRIGRLV R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K S ++++
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 294 D 296
D
Sbjct: 65 D 65
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/79 (41%), Positives = 38/79 (48%)
Frame = +3
Query: 576 LPHLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSXKLWXDAPWCSTKHHSXPXLGAAQ 755
L LAKVIHDNF I+EGLM DGPS K W ++ + GAA+
Sbjct: 182 LAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGR-AASFNIIPSSTGAAK 240
Query: 756 XCGXXYPLPPNGTLTGMPF 812
G P NG LTGM F
Sbjct: 241 AVGKVLP-DLNGKLTGMSF 258
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 100 bits (239), Expect = 2e-21
Identities = 54/100 (54%), Positives = 65/100 (65%), Gaps = 14/100 (14%)
Frame = +1
Query: 301 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHL------------- 441
+L+ ++AVF R+P+ IPW AGAEYVVESTGVFT DKA+AHL
Sbjct: 73 TLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFH 132
Query: 442 -EGGAKKVIISAPSADAPMXVVGVNLXAYDPSFKVISNAS 558
+GGAKKV+ISAPS DAPM VVGVN Y ++SNAS
Sbjct: 133 MQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNAS 172
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/56 (53%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +3
Query: 135 GFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK-GSVEVQD 296
GFGRIGRLV R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKD 70
Score = 45.2 bits (102), Expect = 7e-05
Identities = 32/79 (40%), Positives = 37/79 (46%)
Frame = +3
Query: 576 LPHLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSXKLWXDAPWCSTKHHSXPXLGAAQ 755
L LAKVI+D F IVEGLM DGPS K W ++ + GAA+
Sbjct: 178 LAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGR-AASFNIIPSSTGAAK 236
Query: 756 XCGXXYPLPPNGTLTGMPF 812
G P NG LTGM F
Sbjct: 237 AVGKVLP-ALNGKLTGMAF 254
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 298 DSLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP 477
+++ V+G I V S+R+P +PWG+ G + V+E TGVF D A H++ GAKKV+I+AP
Sbjct: 131 NAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAP 190
Query: 478 -SADAPMXVVGVNLXAYDPSFKVISNAS 558
D P VVGVN Y P +ISNAS
Sbjct: 191 GKGDIPTYVVGVNADQYSPDEPIISNAS 218
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 120 KIGINGFGRIGRLVLRASIEKG----AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE 287
K+ INGFGRIGR LR +G V+AIND G+ +L KYDST G F V+
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 77.4 bits (182), Expect = 1e-14
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +1
Query: 301 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS 480
++ V+G I V S RDP +PW + G + V+E TGVF A H++ GAKKVII+AP+
Sbjct: 142 TISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 201
Query: 481 --ADAPMXVVGVNLXAYDPSF-KVISNAS 558
AD P V+GVN Y +ISNAS
Sbjct: 202 KGADIPTYVLGVNEGDYSHEVANIISNAS 230
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 105 ADNMSKIGINGFGRIGRLVLRASIEK---GAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 275
A+ K+ INGFGRIGR LR E+ +VV +ND G+ +L KYDS G FK
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFK 132
Query: 276 GSVEVQD 296
V++ D
Sbjct: 133 ADVKIVD 139
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 316 GNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDK 426
GNK+ D + + WGK E + E G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 129 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 299
+ G G IGR ++ AS+ +G + P IGLD + L + + R + S++ DG
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQILLAFKAQGARLLEASLDDHDG 68
Query: 300 FLAC*R 317
+A R
Sbjct: 69 LVAAVR 74
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 129 INGFGRIGRLVLRASIEKGAQVVAINDPFIGL--DYMVYLFKYDSTHGR-FKGSVEVQDG 299
+ G G IGR ++ AS+ +G + P IGL D + L + + R + S++ DG
Sbjct: 11 VGGSGYIGRRIVAASLAEGHPTFVLLRPEIGLNIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 300 FLAC*R 317
+A R
Sbjct: 71 LVAAVR 76
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 129 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 299
+ G G IGR ++ AS+ G + P IGLD + L + + R + S++ DG
Sbjct: 11 VGGTGHIGRRIVAASLAAGHPTSVLLRPEIGLDIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 300 FLAC*R 317
+A R
Sbjct: 71 LVAAIR 76
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 512 LTPTTXMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHG 360
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>04_01_0279 + 3743025-3745169
Length = 714
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 160 CSVLLLKRELKWSL*MTLSSVLTIWFIFS-SMIPPMAVLRAVLRFRMDSLLVNGNKIAV 333
C V+ ++ L + + T ++V+ WF F+ ++ P+AV A+ FR++ L + +I V
Sbjct: 240 CRVVEMELSLMYDILYTKAAVMHTWFGFAIRVVSPLAVAAALGLFRLEDDLGSYRQIDV 298
>12_01_0947 -
9396320-9396483,9396822-9397025,9397769-9398009,
9399052-9399387
Length = 314
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 129 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 299
+ G G +GR V+ AS+ G + P IGLD + L + + R + S++ DG
Sbjct: 11 VGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDG 70
Query: 300 FLAC*R 317
+A R
Sbjct: 71 LVAAVR 76
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 129 INGFGRIGRLVLRASIEKGAQVVAIND 209
I GFG +G R EKG +V+A+ D
Sbjct: 211 IQGFGNVGSWAARIIHEKGGKVIALGD 237
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 665 FXCSSCGMNSSHQALNNFKVIMNNLCQVGQDSL 567
F C C ++ S L+N V+ N++ QVG L
Sbjct: 472 FDCLGCRLSQSGVLLSNSFVLFNSMVQVGSSGL 504
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,658,761
Number of Sequences: 37544
Number of extensions: 472828
Number of successful extensions: 1007
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -