Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I12
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0206 + 41990251-41992032,41992131-41992361                       33   0.39 
04_03_0670 - 18544745-18545119,18545319-18545551,18546377-185464...    31   1.6  
07_01_0080 + 587674-588510                                             30   2.8  
04_04_1179 - 31512592-31515126                                         29   6.4  
01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848     29   6.4  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    28   8.4  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    28   8.4  

>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
 Frame = +1

Query: 118 YWEYE-EGYPISGHFSKRHPRDVTWDKQVGG-----GKVFGTLGQNDDGLFGKAGYNREI 279
           +++++ EG P+    S+R  R   W++Q+GG      +++G     D  L     +NR+ 
Sbjct: 215 FYQFDGEGKPMEDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKD--LLTLYNFNRQY 272

Query: 280 FNDDRGKLTGQAYGTRVLGPAGGQYKLRWTSRL 378
            N D+  L+ QA  + +     GQ+K  W  R+
Sbjct: 273 VNMDKTWLSKQAEMSTL---QLGQWKPSWRHRI 302


>04_03_0670 -
           18544745-18545119,18545319-18545551,18546377-18546476,
           18546842-18546910,18547822-18547900,18547989-18548224
          Length = 363

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 269 TERSSMMTAAN*PGRPTAPGSWDLQGDSTNYGGRLD 376
           T R   +T A    RP A  S  LQG++T  GGR+D
Sbjct: 313 TARGPDLTTAAPETRPRAAPSHGLQGEATESGGRMD 348


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P+   PP P  PPP    PP P
Sbjct: 97  PPPSSGSPPPPPPPPPPPPPPPPP 120


>04_04_1179 - 31512592-31515126
          Length = 844

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 SANWISFFVLPINFCVDTHQXPW 85
           +A+W +F VLP N+C+  H  P+
Sbjct: 86  TASWYNFSVLPGNYCLRLHFFPY 108


>01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848
          Length = 345

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 314 PTAPGSWDLQGDS 352
           PT PG+WD++GDS
Sbjct: 229 PTMPGTWDMKGDS 241


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 350  STNYGGRLDWANKNAEAAIDINRQI 424
            S+ +GG L W N + E+ +D +RQ+
Sbjct: 960  SSLHGGSLPWKNTDFESTVDFDRQL 984


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P    PP P  PPP    PP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPP 376



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P    PP P  PPP    PP P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPP 377



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P    PP P  PPP    PP P
Sbjct: 355 PPPPPPPPPPPPPPPPPRPPPPPP 378



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P    PP P  PPP    PP P
Sbjct: 356 PPPPPPPPPPPPPPPPRPPPPPPP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,158,901
Number of Sequences: 37544
Number of extensions: 505382
Number of successful extensions: 2343
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)