Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I12
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    31   1.1  
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    29   3.3  
Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 789 FYPXPNWXXPPXPXXPPPXXXXPPXP 866
           F P P    PP P  PPP    PP P
Sbjct: 55  FCPPPPMCPPPPPPPPPPMCPPPPPP 80


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 789 FYPXPNWXXPPXPXXPPPXXXXPP 860
           F P P W  PP P   PP    PP
Sbjct: 53  FGPPPPWDRPPPPWRRPPWHRRPP 76


>Z72502-7|CAA96592.1|  140|Caenorhabditis elegans Hypothetical
           protein C08B6.10 protein.
          Length = 140

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 801 PNWXXPPXPXXPPPXXXXPP 860
           P W  PP P  PPP    PP
Sbjct: 115 PWWRRPPPPWGPPPPGPPPP 134


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 158  SQSDTRVTSPGTNKWEEGRSSARWAKTMMGFLVKP 262
            S  +TR  + GTNK  +GR+  R     +G ++KP
Sbjct: 3192 SDEETRTRNKGTNKRRDGRNDGR--NMNLGSIIKP 3224


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 795 PXPNWXXPPXPXXPPPXXXXPPXP 866
           P P++  PP P  PP     PP P
Sbjct: 141 PRPHFPGPPGPHRPPEHYPGPPRP 164


>Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical
           protein F14F7.1 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 305 PGRPTAPGSWDLQGD 349
           PGRP APG+W + G+
Sbjct: 118 PGRPGAPGAWGMPGN 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,632,284
Number of Sequences: 27780
Number of extensions: 382595
Number of successful extensions: 1427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)