Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I09
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 90 1e-17
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 83 1e-15
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 83 1e-15
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 81 5e-15
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 80 9e-15
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 78 4e-14
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 78 4e-14
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 78 4e-14
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 78 4e-14
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 75 3e-13
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 75 3e-13
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 71 7e-12
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 50 8e-06
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 44 7e-04
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 44 7e-04
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 41 0.007
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 41 0.007
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 41 0.007
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 39 0.027
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 36 0.25
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 36 0.25
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 35 0.44
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 35 0.44
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 34 0.58
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 34 0.58
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 34 0.58
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 34 0.58
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 34 0.58
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 34 0.58
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 34 0.58
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 34 0.58
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 34 0.58
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 34 0.77
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 34 0.77
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 34 0.77
BC071937-1|AAH71937.1| 312|Homo sapiens zinc finger protein 414... 34 0.77
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 34 0.77
BC007310-1|AAH07310.1| 312|Homo sapiens zinc finger protein 414... 34 0.77
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 34 0.77
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 33 1.0
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 33 1.0
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 33 1.0
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens ... 33 1.4
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 33 1.8
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 33 1.8
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 33 1.8
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 33 1.8
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 33 1.8
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 33 1.8
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 33 1.8
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 32 2.4
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 32 2.4
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 32 2.4
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 32 2.4
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 32 2.4
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 32 2.4
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 32 2.4
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 32 2.4
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 32 2.4
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 32 3.1
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 32 3.1
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.1
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.1
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.1
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.1
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.1
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.1
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.1
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.1
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.1
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.1
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.1
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.1
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 31 4.1
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 5.5
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 5.5
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 31 5.5
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 5.5
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 5.5
BC146811-1|AAI46812.1| 854|Homo sapiens ZNF341 protein protein. 31 7.2
BC132873-1|AAI32874.1| 854|Homo sapiens ZNF341 protein protein. 31 7.2
BC094738-1|AAH94738.1| 795|Homo sapiens ZNF341 protein protein. 31 7.2
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 31 7.2
BC010086-1|AAH10086.1| 112|Homo sapiens transmembrane protein 1... 31 7.2
BC007080-1|AAH07080.1| 114|Homo sapiens transmembrane protein 1... 31 7.2
BC002496-1|AAH02496.1| 112|Homo sapiens transmembrane protein 1... 31 7.2
AL358777-7|CAI14003.1| 112|Homo sapiens transmembrane protein 1... 31 7.2
AL050349-3|CAI21796.2| 847|Homo sapiens zinc finger protein 341... 31 7.2
AK223462-1|BAD97182.1| 112|Homo sapiens transmembrane protein 1... 31 7.2
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 89.8 bits (213), Expect = 1e-17
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQREKCFKCNRTGHFARDCKEE 356
MSS+ C+KC R+GH+AREC GG R GF R+ C++C +GH A+DC +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQ 60
Query: 357 ADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATSPGX 536
D CY C GHIA++C + P R G H + R + + G
Sbjct: 61 EDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQKCYSCGEFGH 117
Query: 537 ISRNCPDGTQTCYVCGKPXNLAPSATR 617
I ++C CY CG+ ++A + ++
Sbjct: 118 IQKDCT--KVKCYRCGETGHVAINCSK 142
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 54 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 104
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 105 DEQKCYSCGEFGHIQKDCTK 124
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 74 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 133
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 134 GHVAINCSKTSEVNCYRCGESGHLAREC 161
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 127 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 165
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 83.4 bits (197), Expect = 1e-15
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGG-----VVSRDSGF----NRQREKCFKCNRTGHFARDC 347
MSS+ C+KC R+GH+AREC GG + SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 348 KEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATS 527
+ D CY C GHIA++C + P R G H + R + +
Sbjct: 61 DLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQKCYSCGE 117
Query: 528 PGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
G I ++C CY CG+ ++A + ++
Sbjct: 118 FGHIQKDCT--KVKCYRCGETGHVAINCSK 145
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 57 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 107
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 108 DEQKCYSCGEFGHIQKDCTK 127
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 77 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 136
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 137 GHVAINCSKTSEVNCYRCGESGHLAREC 164
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 168
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 83.4 bits (197), Expect = 1e-15
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGG-----VVSRDSGF----NRQREKCFKCNRTGHFARDC 347
MSS+ C+KC R+GH+AREC GG + SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 348 KEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATS 527
+ D CY C GHIA++C + P R G H + R + +
Sbjct: 61 DLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQKCYSCGE 117
Query: 528 PGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
G I ++C CY CG+ ++A + ++
Sbjct: 118 FGHIQKDCT--KVKCYRCGETGHVAINCSK 145
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 57 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 107
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 108 DEQKCYSCGEFGHIQKDCTK 127
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 77 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 136
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 137 GHVAINCSKTSEVNCYRCGESGHLAREC 164
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 168
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 81.0 bits (191), Expect = 5e-15
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQG-----GVVSRDSGF----NRQREKCFKCNRTGHFARDC 347
MSS+ C+KC R+GH+AREC G G+ SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 348 --KEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITA 521
+E+ + CY C GHIA++C + P R G H + R + +
Sbjct: 61 DLQEDVEACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQKCYSC 117
Query: 522 TSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
G I ++C CY CG+ ++A + ++
Sbjct: 118 GEFGHIQKDCT--KVKCYRCGETGHVAINCSK 147
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 79 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 138
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 139 GHVAINCSKTSEVNCYRCGESGHLAREC 166
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 132 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 170
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 80.2 bits (189), Expect = 9e-15
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQG-----GVVSRDSGF----NRQREKCFKCNRTGHFARDC 347
MSS+ C+KC R+GH+AREC G G+ SR GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 348 K-EEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITAT 524
+E + CY C GHIA++C + P R G H + R + +
Sbjct: 61 DLQEDEACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQKCYSCG 117
Query: 525 SPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
G I ++C CY CG+ ++A + ++
Sbjct: 118 EFGHIQKDCT--KVKCYRCGETGHVAINCSK 146
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 78 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 137
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 138 GHVAINCSKTSEVNCYRCGESGHLAREC 165
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 131 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 169
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCKEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRR 506
GH A+DC + D CY C GHIA++C + P R G H + R +
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQ 117
Query: 507 PAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ G I ++C CY CG+ ++A + ++
Sbjct: 118 KCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 152
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 143
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 144 GHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCKEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRR 506
GH A+DC + D CY C GHIA++C + P R G H + R +
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQ 117
Query: 507 PAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ G I ++C CY CG+ ++A + ++
Sbjct: 118 KCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 152
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 143
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 144 GHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCKEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRR 506
GH A+DC + D CY C GHIA++C + P R G H + R +
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQ 117
Query: 507 PAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ G I ++C CY CG+ ++A + ++
Sbjct: 118 KCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 152
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 143
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 144 GHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCKEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRR 506
GH A+DC + D CY C GHIA++C + P R G H + R +
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADEQ 117
Query: 507 PAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ G I ++C CY CG+ ++A + ++
Sbjct: 118 KCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 152
Score = 62.5 bits (145), Expect = 2e-09
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFARDCKE- 353
+K + CY C R GH A++C + R+RE+ C+ C + GH ARDC
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHA 114
Query: 354 EADRCYRCNGXGHIARECAQ 413
+ +CY C GHI ++C +
Sbjct: 115 DEQKCYSCGEFGHIQKDCTK 134
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 84 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 143
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 144 GHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 175
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 74.9 bits (176), Expect = 3e-13
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCK-EEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXR 503
GH A+DC +E + CY C GHIA++C + P R G H + R
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADE 117
Query: 504 RPAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ + G I ++C CY CG+ ++A + ++
Sbjct: 118 QKCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 153
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 85 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 144
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 145 GHVAINCSKTSEVNCYRCGESGHLAREC 172
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 176
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 74.9 bits (176), Expect = 3e-13
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRD------SGFNRQR----------EKCFKCNRT 326
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 327 GHFARDCK-EEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXR 503
GH A+DC +E + CY C GHIA++C + P R G H + R
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDC-KEPKREREQCCYNCGKPGH--LARDCDHADE 117
Query: 504 RPAITATSPGXISRNCPDGTQTCYVCGKPXNLAPSATR 617
+ + G I ++C CY CG+ ++A + ++
Sbjct: 118 QKCYSCGEFGHIQKDCT--KVKCYRCGETGHVAINCSK 153
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +3
Query: 168 AQEFSKPIAMSSSVCYKCNRTGHFARECTQGG---VVSRDSGFNRQRE----KCFKCNRT 326
A++ +P CY C + GH AR+C S + Q++ KC++C T
Sbjct: 85 AKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGET 144
Query: 327 GHFARDCKEEAD-RCYRCNGXGHIAREC 407
GH A +C + ++ CYRC GH+AREC
Sbjct: 145 GHVAINCSKTSEVNCYRCGESGHLAREC 172
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 176
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 180 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC-KEE 356
+K + ++CY C R+GH A++C +D R R+ C+ C R GH ARDC +++
Sbjct: 57 AKNCVLLGNICYNCGRSGHIAKDC-------KDPKRER-RQHCYTCGRLGHLARDCDRQK 108
Query: 357 ADRCYRCNGXGHIARECAQ 413
+CY C GHI ++CAQ
Sbjct: 109 EQKCYSCGKLGHIQKDCAQ 127
Score = 60.5 bits (140), Expect = 8e-09
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKC---------FKCNRTGHFARDC 347
MSS + C +GH+AR C +GG R G + + +C + C +G A++C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 348 KEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATS 527
+ CY C GHIA++C + P R G H + R + +
Sbjct: 61 VLLGNICYNCGRSGHIAKDC-KDPKRERRQHCYTCGRLGH--LARDCDRQKEQKCYSCGK 117
Query: 528 PGXISRNCPDGTQTCYVCGKPXNLAPSATRXR 623
G I ++C CY CG+ ++A + ++ R
Sbjct: 118 LGHIQKDC--AQVKCYRCGEIGHVAINCSKAR 147
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 50.4 bits (115), Expect = 8e-06
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 303 KCFKCNRTGHFARDCKEEAD-RCYRCNGXGHIAREC 407
KC++C TGH A +C + ++ CYRC GH+AREC
Sbjct: 13 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 48
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 359
CY+C TGH A C++ V+ C++C +GH AR+C EA
Sbjct: 14 CYRCGETGHVAINCSKTSEVN-----------CYRCGESGHLARECTIEA 52
Score = 33.9 bits (74), Expect = 0.77
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 327 GHFARDCKEEADRCYRCNGXGHIARECAQS 416
GH +DC + +CYRC GH+A C+++
Sbjct: 3 GHIQKDCTKV--KCYRCGETGHVAINCSKT 30
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 198 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD----- 362
++ VC+ C + GH +C + ++D G C++C T H CK + D
Sbjct: 126 NAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPALGE 180
Query: 363 ----RCYRCNGXGHIARECAQSP 419
+C+ C GH++R C +P
Sbjct: 181 FPFAKCFVCGEMGHLSRSCPDNP 203
Score = 40.3 bits (90), Expect = 0.009
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE------- 353
M + +CY+C T H +C V G KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKCK--AKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 354 EADRCYRCNGXGHIARECAQS 416
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 198 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD----- 362
++ VC+ C + GH +C + ++D G C++C T H CK + D
Sbjct: 126 NAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPALGE 180
Query: 363 ----RCYRCNGXGHIARECAQSP 419
+C+ C GH++R C +P
Sbjct: 181 FPFAKCFVCGEMGHLSRSCPDNP 203
Score = 40.3 bits (90), Expect = 0.009
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE------- 353
M + +CY+C T H +C V G KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKCK--AKVDPALG-EFPFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 354 EADRCYRCNGXGHIARECAQS 416
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 40.7 bits (91), Expect = 0.007
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 279 SGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXGHIAREC 407
S + Q + CFKC H + C + DRC+RC GH++ C
Sbjct: 162 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 202
Score = 38.7 bits (86), Expect = 0.027
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXG 389
C+KC H + CTQ ++CF+C GH + C+ + C C G
Sbjct: 171 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCNLCGKRG 215
Query: 390 HIARECAQSPGRAVMLQL 443
H +C ++ +V QL
Sbjct: 216 HAFAQCPKAVHNSVAAQL 233
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 40.7 bits (91), Expect = 0.007
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 279 SGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXGHIAREC 407
S + Q + CFKC H + C + DRC+RC GH++ C
Sbjct: 326 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 366
Score = 38.7 bits (86), Expect = 0.027
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXG 389
C+KC H + CTQ ++CF+C GH + C+ + C C G
Sbjct: 335 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCNLCGKRG 379
Query: 390 HIARECAQSPGRAVMLQL 443
H +C ++ +V QL
Sbjct: 380 HAFAQCPKAVHNSVAAQL 397
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 40.7 bits (91), Expect = 0.007
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 279 SGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXGHIAREC 407
S + Q + CFKC H + C + DRC+RC GH++ C
Sbjct: 327 SWYKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYC 367
Score = 38.7 bits (86), Expect = 0.027
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXG 389
C+KC H + CTQ ++CF+C GH + C+ + C C G
Sbjct: 336 CFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCNLCGKRG 380
Query: 390 HIARECAQSPGRAVMLQL 443
H +C ++ +V QL
Sbjct: 381 HAFAQCPKAVHNSVAAQL 398
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 38.7 bits (86), Expect = 0.027
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 195 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREK--CFKCNRTGHFARDC 347
M +C++C R GH REC G R C +C R H+ +C
Sbjct: 503 MRGRICFRCGREGHLMRECRAKFPARDRQGIENSRRPGLCPRCRRGNHWVSEC 555
Score = 30.3 bits (65), Expect = 9.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 267 VSRDSGFNRQREKCFKCNRTGHFARDCK 350
V+R N + CF+C R GH R+C+
Sbjct: 495 VTRQFRQNMRGRICFRCGREGHLMRECR 522
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 35.5 bits (78), Expect = 0.25
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Frame = +3
Query: 189 IAMSSSVCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTG------HF 335
+A + C C + GH+ ++C + + +DS ++ + K +R H
Sbjct: 1160 LAPNDRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHD 1219
Query: 336 ARDCKEEAD-RCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPA 512
RD ++ D RC+ C GH+ REC + V L Q++ + + + R + ++ A
Sbjct: 1220 TRDFRDPRDLRCFICGDAGHVRRECPE-----VKLARQRNSSVAAAQLVRNLVN-AQQVA 1273
Query: 513 ITATSPGXIS---RNCPDGTQTCYVCGKPXNLAPSATRXRN*PQPPCSPLYNPTMYIMIA 683
+A G S R + +++ +P ++++ QP P P +
Sbjct: 1274 GSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQP----KLG 1329
Query: 684 PPRXISQGRHAXXKRITDYPXXMHTRXPPPXTEP-MKLHXLPXYIXPXPLXGP 839
PP+ +Q H + ++P + P + +H L P+ GP
Sbjct: 1330 PPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGP 1382
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 35.5 bits (78), Expect = 0.25
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Frame = +3
Query: 189 IAMSSSVCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTG------HF 335
+A + C C + GH+ ++C + + +DS ++ + K +R H
Sbjct: 1288 LAPNDRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPRDLHD 1347
Query: 336 ARDCKEEAD-RCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRPA 512
RD ++ D RC+ C GH+ REC + V L Q++ + + + R + ++ A
Sbjct: 1348 TRDFRDPRDLRCFICGDAGHVRRECPE-----VKLARQRNSSVAAAQLVRNLVN-AQQVA 1401
Query: 513 ITATSPGXIS---RNCPDGTQTCYVCGKPXNLAPSATRXRN*PQPPCSPLYNPTMYIMIA 683
+A G S R + +++ +P ++++ QP P P +
Sbjct: 1402 GSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQP----KLG 1457
Query: 684 PPRXISQGRHAXXKRITDYPXXMHTRXPPPXTEP-MKLHXLPXYIXPXPLXGP 839
PP+ +Q H + ++P + P + +H L P+ GP
Sbjct: 1458 PPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGP 1510
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 34.7 bits (76), Expect = 0.44
Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 17/234 (7%)
Frame = +3
Query: 189 IAMSSSVCYKCNRTGHFARECTQG------GVVSRDSGFNRQREKCFKCNRTG------H 332
+A + C C + GH+ ++C + + +DS ++ + K +R H
Sbjct: 1288 LAPNDRCCRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPRDLH 1347
Query: 333 FARDCKEEAD-RCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGTVPRGGGSLXRRP 509
RD ++ D RC+ C GH+ REC + V L Q++ + + + R + ++
Sbjct: 1348 DTRDFRDPRDLRCFICGDAGHVRRECPE-----VKLARQRNSSVAAAQLVRNLVN-AQQV 1401
Query: 510 AITATSPGXIS---RNCPDGTQTCYVCGKPXNLAPSATRXRN*PQPPCSPLYNPTMYIMI 680
A +A G S R + +++ +P ++++ QP P P +
Sbjct: 1402 AGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQP----KL 1457
Query: 681 APPRXISQGRHAXXKRITDYPXXMHTRXPPPXTEP-MKLHXLPXYIXPXPLXGP 839
PP+ +Q H + ++P + P + +H L P+ GP
Sbjct: 1458 GPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGP 1511
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGXGH 392
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVPKM 291
Query: 393 IAREC 407
+ R C
Sbjct: 292 LDRSC 296
Score = 27.1 bits (57), Expect(2) = 3.2
Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 9/65 (13%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGH--------FARECTQGGVVSRDSGFNRQREK-CFKCNRTGHFA 338
P+ C+ C+R GH C ++ R F +K C +C+ GH+
Sbjct: 257 PLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDRSCLFRHSWDKQCDRCHMLGHYT 316
Query: 339 RDCKE 353
C E
Sbjct: 317 DACTE 321
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 366 CYRCNGXGHIARECAQ 413
CY C GH EC +
Sbjct: 350 CYHCAQKGHYGHECPE 365
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPP 146
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 185
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 186 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 215
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPP 146
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 185
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 186 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 215
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPP 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 162
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 163 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 192
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPP 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 162
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 163 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 192
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPP 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 162
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 163 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 192
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPP 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 162
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 163 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 192
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPP 123
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 162
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 163 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 192
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPP 146
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 185
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 186 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 215
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 34.3 bits (75), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
K + DRCY C G H A+EC+ P
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPP 146
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC-----AQSPGRAVMLQLQQDGA 458
++C+ C H A++C + +C+ C H+ C AQ P + Q + +
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQ-EAESQ 185
Query: 459 TSHGTVPR--GGGSLXRRPAITATSPGXIS 542
T+PR GGG P + IS
Sbjct: 186 PCTSTLPREVGGGHGCTSPPFPQEARAEIS 215
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.77
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGHFARECTQG 260
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.77
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGHFARECTQG 260
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.77
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGHFARECTQG 260
P + CYKC GH+A CT+G
Sbjct: 237 PRPLEQVTCYKCGEKGHYANRCTKG 261
>BC071937-1|AAH71937.1| 312|Homo sapiens zinc finger protein 414
protein.
Length = 312
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 532 PGLVAVIAG----LR--XRLPPPLGTVPCDVAPSCCSCNMTARPGLCAHSRAMCP 386
PGL ++++G LR R PPP +PC +P CC + R L H R CP
Sbjct: 83 PGLTSIVSGTSEDLRPPRRRPPPGKQIPCS-SPGCCLSFPSVR-DLAQHLRTHCP 135
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 33.9 bits (74), Expect = 0.77
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGHFARECTQG 260
P + CYKC GH+A CT+G
Sbjct: 211 PRPLEQVTCYKCGEKGHYANRCTKG 235
>BC007310-1|AAH07310.1| 312|Homo sapiens zinc finger protein 414
protein.
Length = 312
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 532 PGLVAVIAG----LR--XRLPPPLGTVPCDVAPSCCSCNMTARPGLCAHSRAMCP 386
PGL ++++G LR R PPP +PC +P CC + R L H R CP
Sbjct: 83 PGLTSIVSGTSEDLRPPRRRPPPGKQIPCS-SPGCCLSFPSVR-DLAQHLRTHCP 135
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.77
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 186 PIAMSSSVCYKCNRTGHFARECTQG 260
P + CYKC GH+A CT+G
Sbjct: 212 PRPLEQVTCYKCGEKGHYANRCTKG 236
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 33.5 bits (73), Expect = 1.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 306 CFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
C C++ GH +++C + RC+ C+ GH+ C
Sbjct: 242 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 277
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 377
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 234 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 285
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 33.5 bits (73), Expect = 1.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 306 CFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
C C++ GH +++C + RC+ C+ GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 377
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 33.5 bits (73), Expect = 1.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 306 CFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
C C++ GH +++C + RC+ C+ GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 377
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 33.5 bits (73), Expect = 1.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 306 CFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
C C++ GH +++C + RC+ C+ GH+ C
Sbjct: 91 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 126
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 377
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 83 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 134
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 33.5 bits (73), Expect = 1.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 306 CFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
C C++ GH +++C + RC+ C+ GH+ C
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC 278
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 213 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 377
Y N+ R C + G +S++ R+ +CF C+R GH C A C C
Sbjct: 235 YSANKN-IICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ34176 fis, clone FCBBF3016178. ).
Length = 212
Score = 33.1 bits (72), Expect = 1.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 273 RDSGFNRQREKCFKCNRTGHFARDCKE 353
R G N + KC+ C + GHF ++C++
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKECRQ 152
Score = 30.3 bits (65), Expect = 9.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 210 CYKCNRTGHFARECTQ 257
CY C + GHF +EC Q
Sbjct: 137 CYNCEKPGHFKKECRQ 152
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
+ + DRCY C G H A+EC P
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPP 156
Score = 32.7 bits (71), Expect = 1.8
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 156 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 299
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 836 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 883
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 264 VVSRDSGFNRQRE---KCFKCNRTGHFARDCKEEA 359
VV+ SG ++ C+ C +GH+A+DCK+ +
Sbjct: 837 VVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSS 871
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
+ + DRCY C G H A+EC P
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPP 156
Score = 32.7 bits (71), Expect = 1.8
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
+ + DRCY C G H A+EC P
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPP 156
Score = 32.7 bits (71), Expect = 1.8
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 156 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 299
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 235 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 282
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 264 VVSRDSGFNRQRE---KCFKCNRTGHFARDCKEEA 359
VV+ SG ++ C+ C +GH+A+DCK+ +
Sbjct: 236 VVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSS 270
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 32.7 bits (71), Expect = 1.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 348 KEEADRCYRCNGXGHIARECAQSP 419
+ + DRCY C G H A+EC P
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPP 156
Score = 32.7 bits (71), Expect = 1.8
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 300 EKCFKCNRTGHFARDCK--EEADRCYRCNGXGHIAREC 407
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 156 SVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR 299
+V++ S P + CY C +GH+A++C Q + + G R R
Sbjct: 792 NVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLR 839
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 264 VVSRDSGFNRQRE---KCFKCNRTGHFARDCKEEA 359
VV+ SG ++ C+ C +GH+A+DCK+ +
Sbjct: 793 VVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSS 827
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 369
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 32.3 bits (70), Expect = 2.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 420 GRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATSPGXISRNCP 554
GRA ++ GA + V RGGG + RPAI + G RN P
Sbjct: 6 GRAGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRP 50
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 619 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 673
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 674 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 712
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 619 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 673
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 674 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 712
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1739 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1793
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1832
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1734 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1788
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1827
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1714 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1768
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1807
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1739 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1793
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1832
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1734 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1788
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1827
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1714 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1768
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1807
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1739 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1793
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1832
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1734 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1788
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1827
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1714 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1768
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1769 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1807
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1739 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1793
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1794 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1832
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1734 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1788
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1789 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1827
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.1
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +3
Query: 588 PXNLAPSATRXRN*PQPPCSPLYNPTMYIMIAPPRXISQGRHAXXKRITDYPXXMHTRXP 767
P N++PSA P PP SP P +APP IS P + P
Sbjct: 1737 PPNISPSACPLP--PPPPISPPSPPPAPAPLAPPPDISPFSLFCP---PPSPPSIPLPLP 1791
Query: 768 PPXTEPMKLH----XLPXYIXPXPLXGPXPXLSLPPXKP 872
PP P+ + P + P P P P S+P P
Sbjct: 1792 PPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPP 1830
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 210 CYKCNRTGHFAREC----TQGGVVSRDSGFNRQ-REKCFKCNRTGHFARDCKEEADR 365
CY C + GH + C Q + + R+ + C +C + H+A C+ + D+
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQNITIQATTTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 261 GVVSRDSGFNRQRE---KCFKCNRTGHFARDCKE 353
G+V +G + ++ C+ C TGH A+DCK+
Sbjct: 890 GLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 923
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 261 GVVSRDSGFNRQRE---KCFKCNRTGHFARDCKE 353
G+V +G + ++ C+ C TGH A+DCK+
Sbjct: 773 GLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 806
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 31.1 bits (67), Expect = 5.5
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +3
Query: 294 QREKCFKCNRTGHFARDCKEEADRCYRCNGXGHIARECAQSPGRAVMLQLQQDGATSHGT 473
+R KCF R+ +R + E + + + + P L ATSHG
Sbjct: 1039 ERRKCFLV-RSPSLSRPPESELEVAPKGRQESEEPQPSSSKPSAKSSLSQISSAATSHGG 1097
Query: 474 VPRGGGSLXRRPAITATSP 530
P G G RPA+ T P
Sbjct: 1098 PPGGKGPGQDRPALGPTVP 1116
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 261 GVVSRDSGFNRQRE---KCFKCNRTGHFARDCKE 353
G+V +G + ++ C+ C TGH A+DCK+
Sbjct: 890 GLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 261 GVVSRDSGFNRQRE---KCFKCNRTGHFARDCKE 353
G+V +G + ++ C+ C TGH A+DCK+
Sbjct: 851 GLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 884
>BC146811-1|AAI46812.1| 854|Homo sapiens ZNF341 protein protein.
Length = 854
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 765 PPPXTEPMKLHXLPXYI-XPXPLXGPXPXLSLPP 863
PPP + +H +P Y+ P P P P L PP
Sbjct: 159 PPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPP 192
>BC132873-1|AAI32874.1| 854|Homo sapiens ZNF341 protein protein.
Length = 854
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 765 PPPXTEPMKLHXLPXYI-XPXPLXGPXPXLSLPP 863
PPP + +H +P Y+ P P P P L PP
Sbjct: 159 PPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPP 192
>BC094738-1|AAH94738.1| 795|Homo sapiens ZNF341 protein protein.
Length = 795
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 765 PPPXTEPMKLHXLPXYI-XPXPLXGPXPXLSLPP 863
PPP + +H +P Y+ P P P P L PP
Sbjct: 100 PPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPP 133
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 420 GRAVMLQLQQDGATSHGTVPRGGGSLXRRPAITATSPGXISRNCP 554
GRA + GA + V RGGG + RPAI + G RN P
Sbjct: 30 GRAGSQGGRGGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRP 74
>BC010086-1|AAH10086.1| 112|Homo sapiens transmembrane protein 14C
protein.
Length = 112
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 806 GQXVELHWFSXGGXTPGVHXXGVIGYSFXGGVASLA 699
G V LHWF G V G+IGY G V SLA
Sbjct: 5 GSVVPLHWFGFG-YAALVASGGIIGYVKAGSVPSLA 39
>BC007080-1|AAH07080.1| 114|Homo sapiens transmembrane protein 14B
protein.
Length = 114
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 797 VELHWFSXGGXTPGVHXXGVIGYSFXGGVASLA 699
V LHWF G T V G++GY G V+SLA
Sbjct: 9 VPLHWFGFG-YTALVVSGGIVGYVKTGSVSSLA 40
>BC002496-1|AAH02496.1| 112|Homo sapiens transmembrane protein 14C
protein.
Length = 112
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 806 GQXVELHWFSXGGXTPGVHXXGVIGYSFXGGVASLA 699
G V LHWF G V G+IGY G V SLA
Sbjct: 5 GSVVPLHWFGFG-YAALVASGGIIGYVKAGSVPSLA 39
>AL358777-7|CAI14003.1| 112|Homo sapiens transmembrane protein 14C
protein.
Length = 112
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 806 GQXVELHWFSXGGXTPGVHXXGVIGYSFXGGVASLA 699
G V LHWF G V G+IGY G V SLA
Sbjct: 5 GSVVPLHWFGFG-YAALVASGGIIGYVKAGSVPSLA 39
>AL050349-3|CAI21796.2| 847|Homo sapiens zinc finger protein 341
protein.
Length = 847
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 765 PPPXTEPMKLHXLPXYI-XPXPLXGPXPXLSLPP 863
PPP + +H +P Y+ P P P P L PP
Sbjct: 159 PPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPP 192
>AK223462-1|BAD97182.1| 112|Homo sapiens transmembrane protein 14C
variant protein.
Length = 112
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 806 GQXVELHWFSXGGXTPGVHXXGVIGYSFXGGVASLA 699
G V LHWF G + V G+IGY G V SLA
Sbjct: 5 GSVVPLHWFGFGYASL-VASGGIIGYVKAGSVPSLA 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,045,923
Number of Sequences: 237096
Number of extensions: 2477405
Number of successful extensions: 8565
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 6844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8213
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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