Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I07
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0422 + 3034556-3034777,3034859-3035138,3036398-3036483,303...    30   2.6  
03_03_0046 + 14040331-14040801,14040915-14041050,14041159-140412...    28   7.8  
01_07_0311 + 42667114-42667132,42667336-42667367,42667449-426678...    28   7.8  

>06_01_0422 +
           3034556-3034777,3034859-3035138,3036398-3036483,
           3036614-3036837,3036911-3036971,3037634-3037828,
           3037981-3038205
          Length = 430

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 584 CSSDYXKTSLGLKQALRVKYNQNYQTVFGDDPEAMDSLQKSEQEPA 721
           C+SD       LKQ+L   Y++  + +  +   AM+ +++ E+E A
Sbjct: 116 CASDCKAAIRALKQSLDEHYHKGTEAILDEAESAMEEMEELEKEAA 161


>03_03_0046 +
           14040331-14040801,14040915-14041050,14041159-14041295,
           14041366-14041965
          Length = 447

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 363 EFVGLVCDDEEMLIVYRF--RGLSAEHPLRR 277
           + +G  C+DEE L+VY F  RG    H  +R
Sbjct: 173 KLLGYCCEDEERLLVYEFMPRGSLENHLFKR 203


>01_07_0311 +
           42667114-42667132,42667336-42667367,42667449-42667822,
           42667895-42668028,42668147-42668303,42668994-42669098,
           42669342-42669645,42670404-42670478,42671467-42672589,
           42673686-42673727,42674017-42674111,42674199-42674239,
           42674375-42674414
          Length = 846

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 509 FWRR*HRSTSWISGTISAQHQVSRACSSDYXKTSLGLKQALRVKYNQNYQTVFGDDP 679
           F  R HR  + ++G    +H V  A +++      GLK A+   ++QN Q   G+DP
Sbjct: 733 FLVRDHRGCAVLAGAGCLEH-VHDAFAAEAEAGLAGLKSAISHGFDQNQQCHRGEDP 788


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,862,436
Number of Sequences: 37544
Number of extensions: 356417
Number of successful extensions: 798
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)