Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I07
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20861-14|AAN63440.1|  245|Caenorhabditis elegans Hypothetical p...   166   2e-41
U20861-12|AAA62299.1|  403|Caenorhabditis elegans Hypothetical p...   166   2e-41
U21320-7|AAA62533.1|  558|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical...    28   7.0  

>U20861-14|AAN63440.1|  245|Caenorhabditis elegans Hypothetical
           protein C28H8.11b protein.
          Length = 245

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/127 (60%), Positives = 100/127 (78%)
 Frame = +1

Query: 235 GMLYGEYLMLDKLLSAQRMLSAESSKPVHDEHLFIITHQAYELWFKQIIFEVDSVRALLN 414
           G  Y EYL LDK+L+AQR+ S    + V DEHLFI+ HQA+ELWFKQIIF++D+VR LLN
Sbjct: 36  GQTYSEYLQLDKILTAQRLKSEADGQRVDDEHLFIVIHQAHELWFKQIIFDLDNVRKLLN 95

Query: 415 VEGLDESHTMEILKRLNRIVLILKLLVDQVMILETMTPLDFMDFRHYLRPASGFQSLQFR 594
              +DE+ T++I+  L+R+  IL LL +Q+ +L+TM+PLDF+DFR YL PASGFQSLQFR
Sbjct: 96  NTIVDETKTLKIVSGLDRMTKILSLLTEQITLLDTMSPLDFVDFRKYLTPASGFQSLQFR 155

Query: 595 LLXNKLG 615
           +L NKLG
Sbjct: 156 VLENKLG 162



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +2

Query: 602 KTSLGLKQALRVKYN-QNYQTVFGDDPEAMDSLQKSEQEPALLXLIXXWLXRTPGLKHXT 778
           +  LG++Q  R+KYN Q+Y+ VF D    + +L  +E+E +LL LI  WL RTPGLK  +
Sbjct: 158 ENKLGVRQERRIKYNAQHYKNVFNDTD--LKTLNVTEEEKSLLTLIESWLERTPGLKSTS 215

Query: 779 -GFNFW 793
               FW
Sbjct: 216 EDEGFW 221


>U20861-12|AAA62299.1|  403|Caenorhabditis elegans Hypothetical
           protein C28H8.11a protein.
          Length = 403

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/127 (60%), Positives = 100/127 (78%)
 Frame = +1

Query: 235 GMLYGEYLMLDKLLSAQRMLSAESSKPVHDEHLFIITHQAYELWFKQIIFEVDSVRALLN 414
           G  Y EYL LDK+L+AQR+ S    + V DEHLFI+ HQA+ELWFKQIIF++D+VR LLN
Sbjct: 36  GQTYSEYLQLDKILTAQRLKSEADGQRVDDEHLFIVIHQAHELWFKQIIFDLDNVRKLLN 95

Query: 415 VEGLDESHTMEILKRLNRIVLILKLLVDQVMILETMTPLDFMDFRHYLRPASGFQSLQFR 594
              +DE+ T++I+  L+R+  IL LL +Q+ +L+TM+PLDF+DFR YL PASGFQSLQFR
Sbjct: 96  NTIVDETKTLKIVSGLDRMTKILSLLTEQITLLDTMSPLDFVDFRKYLTPASGFQSLQFR 155

Query: 595 LLXNKLG 615
           +L NKLG
Sbjct: 156 VLENKLG 162



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +2

Query: 602 KTSLGLKQALRVKYN-QNYQTVFGDDPEAMDSLQKSEQEPALLXLIXXWLXRTPGLKHXT 778
           +  LG++Q  R+KYN Q+Y+ VF D    + +L  +E+E +LL LI  WL RTPGLK  +
Sbjct: 158 ENKLGVRQERRIKYNAQHYKNVFNDTD--LKTLNVTEEEKSLLTLIESWLERTPGLKSTS 215

Query: 779 -GFNFW 793
               FW
Sbjct: 216 EDEGFW 221


>U21320-7|AAA62533.1|  558|Caenorhabditis elegans Hypothetical
           protein K04G7.1 protein.
          Length = 558

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 558 EIVPEIHEVERCHRLQNHHLIHQQFQDEHNP 466
           E+  E  EVE  H ++NHH ++++ ++E  P
Sbjct: 518 EVQEEQLEVEHHHVMENHHQVYEEVEEEVVP 548


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 522 HRLQNHHLIHQQFQDEHNPVESLQYLHGVA 433
           HR  + H IH   Q +H   +  QYLH  A
Sbjct: 421 HRPPHQHPIHHHHQSQHQLHQHQQYLHHAA 450


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 522 HRLQNHHLIHQQFQDEHNPVESLQYLHGVA 433
           HR  + H IH   Q +H   +  QYLH  A
Sbjct: 388 HRPPHQHPIHHHHQSQHQLHQHQQYLHHAA 417


>AL110500-13|CAB54495.1|  791|Caenorhabditis elegans Hypothetical
           protein Y87G2A.12 protein.
          Length = 791

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 543 IHEVERCHRLQNHHL-IHQQFQDEHNPVES 457
           I+  +R H  Q HH+  HQQ Q   +P++S
Sbjct: 170 INNQQRAHESQQHHISTHQQGQMHFSPIQS 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,552,341
Number of Sequences: 27780
Number of extensions: 302749
Number of successful extensions: 714
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)