Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I07
         (822 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.16 
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    25   0.64 
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    25   0.64 
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    25   0.64 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    25   0.64 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    25   1.1  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   6.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -1

Query: 534 VERCHRLQN--HHLIHQQFQDEHNPVESLQ 451
           ++R H LQN  HHL     QD H P +  Q
Sbjct: 138 LQRHHHLQNHHHHLQSTAVQDHHRPYQQQQ 167


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 803 DFPPRS*TPWXVSIREYXP 747
           +FPPRS  PW +SI+E  P
Sbjct: 125 NFPPRSMGPW-ISIQEQIP 142


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 803 DFPPRS*TPWXVSIREYXP 747
           +FPPRS  PW +SI+E  P
Sbjct: 125 NFPPRSMGPW-ISIQEQIP 142


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 803 DFPPRS*TPWXVSIREYXP 747
           +FPPRS  PW +SI+E  P
Sbjct: 125 NFPPRSMGPW-ISIQEQIP 142


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 803 DFPPRS*TPWXVSIREYXP 747
           +FPPRS  PW +SI+E  P
Sbjct: 358 NFPPRSMGPW-ISIQEQIP 375


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 803 DFPPRS*TPWXVSIREYXP 747
           +FPPRS  PW +S++E  P
Sbjct: 373 NFPPRSMEPW-ISMQEQIP 390


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 357 VGLVCDDEEMLIVYRFRG 304
           VGL  +DEE L+   FRG
Sbjct: 20  VGLCSEDEERLVRDLFRG 37


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 304 SSKPVHDEHLFIITHQAYELWFKQIIFEVDSVRAL-LNVEGL 426
           S+KPV DE++ +++++  ++      F+  + R L  NV+ L
Sbjct: 367 SNKPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVKEL 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,277
Number of Sequences: 438
Number of extensions: 3709
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)