Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_I06
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens ... 31 4.7
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 31 6.2
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 31 6.2
AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein p... 31 6.2
AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein p... 31 6.2
AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein p... 31 6.2
AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein p... 31 6.2
AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein p... 31 6.2
AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha... 31 6.2
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 31 6.2
AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A... 31 6.2
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 31 6.2
>AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ33731 fis, clone BRAWH2017685, moderately
similar to Mus musculus mRNA for nuclear protein ZAP. ).
Length = 723
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXPP 470
SA PP P P F G P PPP + P PP
Sbjct: 153 SAGPPPVLPPPSLFSAGPPPVLPPPSLSSTAPPPVMPLPP 192
>L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 30.7 bits (66), Expect = 6.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 361 PPLXPLXPXLSXAXNRXPXPXQGGXTGFPXKXGGXPRXXPXXPKGXP 501
PP P P A + P + G G P G R P PKG P
Sbjct: 54 PPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAP 100
>BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alpha 3
protein.
Length = 684
Score = 30.7 bits (66), Expect = 6.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 361 PPLXPLXPXLSXAXNRXPXPXQGGXTGFPXKXGGXPRXXPXXPKGXP 501
PP P P A + P + G G P G R P PKG P
Sbjct: 54 PPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAP 100
>AY188338-1|AAO12060.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AY188337-1|AAO12059.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AY188336-1|AAO12058.1| 903|Homo sapiens ataxin-2-like protein
protein.
Length = 903
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AY188335-1|AAO12057.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AY188334-1|AAO12056.1| 883|Homo sapiens ataxin-2-like protein
protein.
Length = 883
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AL035669-11|CAI95767.2| 191|Homo sapiens collagen type IX alpha 3
protein.
Length = 191
Score = 30.7 bits (66), Expect = 6.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 361 PPLXPLXPXLSXAXNRXPXPXQGGXTGFPXKXGGXPRXXPXXPKGXP 501
PP P P A + P + G G P G R P PKG P
Sbjct: 17 PPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAP 63
>AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha 3
protein.
Length = 684
Score = 30.7 bits (66), Expect = 6.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 361 PPLXPLXPXLSXAXNRXPXPXQGGXTGFPXKXGGXPRXXPXXPKGXP 501
PP P P A + P + G G P G R P PKG P
Sbjct: 54 PPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAP 100
>AF034373-1|AAC69607.1| 1051|Homo sapiens ataxin-2-like protein A2LP
protein.
Length = 1051
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SAXXPPXSPXPRSFXCGKPVXXPPPRGXNRFPXKXRGXP-PXXTFXXKRXPXXGPXXP 521
+A PP P S G P PRG R P G P P + +R P GP P
Sbjct: 15 AARPPPLPPRGASSRRGFLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSPGPLSP 72
>AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collagen
protein.
Length = 684
Score = 30.7 bits (66), Expect = 6.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 361 PPLXPLXPXLSXAXNRXPXPXQGGXTGFPXKXGGXPRXXPXXPKGXP 501
PP P P A + P + G G P G R P PKG P
Sbjct: 54 PPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAP 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,137,270
Number of Sequences: 237096
Number of extensions: 1384362
Number of successful extensions: 2760
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2706
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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