Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_I02
         (854 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   1.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   4.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.4  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 316 VDRQPPLRSPFSWTWK 269
           V R PP RSP+ W  K
Sbjct: 114 VARPPPARSPYEWIKK 129


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 316 VDRQPPLRSPFSWTWK 269
           V R PP RSP+ W  K
Sbjct: 114 VARPPPARSPYEWIKK 129


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 16  PHYREFLRFDSPTEANEKTKMLASTHIPGCDR 111
           P+ +E  R   P   + + K + S HIPGC +
Sbjct: 294 PNCQEAERL-GPAGVHLRKKNIHSCHIPGCGK 324


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -2

Query: 499 SWSTTALPMMPCGPDSEIWSSTRS 428
           +WST   P     P    WS T S
Sbjct: 306 TWSTVQTPTTVMSPTINCWSLTSS 329


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 669 PXXXPPPPPV 698
           P   PPPPPV
Sbjct: 159 PLHYPPPPPV 168


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 282 HGRGSHIHPEAA 247
           HG  +H+HP+ A
Sbjct: 5   HGSNTHLHPDDA 16


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 282 HGRGSHIHPEAA 247
           HG  +H+HP+ A
Sbjct: 5   HGSNTHLHPDDA 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,284
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)