Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H24
         (924 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   2.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 24/76 (31%), Positives = 36/76 (47%)
 Frame = -1

Query: 582  APRSSDXGXLLFEQVVHXAAQRVEVGRVGNGAGASS*SRTPWRSGRGCCCGTN*PGLXRR 403
            AP +     +  ++     +QR    R  +G+G+ S SR+   S  G   G+   G   R
Sbjct: 1042 APATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGS---GSRSR 1098

Query: 402  AAPRSRECGSRSGSAR 355
            +  RSR   SRSGSA+
Sbjct: 1099 SRSRSRS-RSRSGSAK 1113


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect(2) = 2.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 890 PPXPPPPXP 916
           PP PPPP P
Sbjct: 582 PPAPPPPPP 590



 Score = 20.6 bits (41), Expect(2) = 2.2
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 860 YPPXPXQLXSPPXPPPP 910
           +P  P     P  PPPP
Sbjct: 573 FPNLPNAQPPPAPPPPP 589


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 881 LXSPPXPPPPXP 916
           + SPP PPPP P
Sbjct: 780 IGSPPPPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,372
Number of Sequences: 2352
Number of extensions: 10575
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)