Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H24
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 31 0.88
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 30 2.0
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 30 2.0
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 30 2.0
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 30 2.0
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 30 2.7
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 30 2.7
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 30 2.7
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 30 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 5.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 5.3
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 29 6.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 6.2
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 6.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.2
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 857 IYPPXPXQLXSPPXPPPPXP 916
I PP P + +PP PPPP P
Sbjct: 2277 IPPPPPGYMHTPPLPPPPPP 2296
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H+ P P + PP PPPP P
Sbjct: 238 HVVPEPPREKSVPPPPPPPPP 258
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H+ P P + PP PPPP P
Sbjct: 253 HVVPEPPREKSVPPPPPPPPP 273
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H+ P P + PP PPPP P
Sbjct: 238 HVVPEPPREKSVPPPPPPPPP 258
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H+ P P + PP PPPP P
Sbjct: 253 HVVPEPPREKSVPPPPPPPPP 273
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H PP P PP PPPP P
Sbjct: 779 HSAPPSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 854 HIYPPXPXQLXSPPXPPPPXP 916
H PP P PP PPPP P
Sbjct: 678 HSAPPSPLTAPIPPPPPPPPP 698
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P +L PP PPPP
Sbjct: 150 PPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P +L PP PPPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P +L PP PPPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P +L PP PPPP
Sbjct: 791 PPPPVELSPPPRPPPP 806
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P L PP PPPP
Sbjct: 580 PPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPPXP 916
PP P L P PPPP P
Sbjct: 566 PPLPQNLSGAPPPPPPPP 583
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPPXPQ 919
PP P PP PPPP P+
Sbjct: 135 PPTPAAPPPPPPPPPPAPE 153
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 5.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 890 PPXPPPPXPQ 919
PP PPPP PQ
Sbjct: 609 PPPPPPPPPQ 618
Score = 22.2 bits (45), Expect(2) = 5.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 872 PXQLXSPPXPPPP 910
P + PP PPPP
Sbjct: 605 PHAVPPPPPPPPP 617
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 5.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 890 PPXPPPPXPQ 919
PP PPPP PQ
Sbjct: 435 PPPPPPPPPQ 444
Score = 22.2 bits (45), Expect(2) = 5.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 872 PXQLXSPPXPPPP 910
P + PP PPPP
Sbjct: 431 PHAVPPPPPPPPP 443
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 866 PXPXQLXSPPXPPPPXP 916
P P L PP PPPP P
Sbjct: 353 PQPQSLVPPPPPPPPPP 369
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Frame = +2
Query: 287 DFNDRHKLSAASAGARSGQCKRARAEPDRDPHSXXXXXXXXXXPGQFVPQQQPRPERQGV 466
D ++ SA +G SG + P P + PGQ PQQ P+ GV
Sbjct: 39 DVDNNPSTSAGGSGGPSGSTPHPQGTPQPAPSNNGGFNLQ---PGQSQPQQPPQNMGGGV 95
Query: 467 RD---QELAPAPFPTRPTSTRXAA 529
QEL P T S R A
Sbjct: 96 NGSVLQELLMNPSQTSNNSPRPQA 119
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Frame = +2
Query: 287 DFNDRHKLSAASAGARSGQCKRARAEPDRDPHSXXXXXXXXXXPGQFVPQQQPRPERQGV 466
D ++ SA +G SG + P P + PGQ PQQ P+ GV
Sbjct: 39 DVDNNPSTSAGGSGGPSGSTPHPQGTPQPAPSNNGGFNLQ---PGQSQPQQPPQNMGGGV 95
Query: 467 RD---QELAPAPFPTRPTSTRXAA 529
QEL P T S R A
Sbjct: 96 NGSVLQELLMNPSQTSNNSPRPQA 119
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P + SPP PPPP
Sbjct: 298 PPPPIKEESPPPPPPP 313
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P + SPP PPPP
Sbjct: 298 PPPPIKEESPPPPPPP 313
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 863 PPXPXQLXSPPXPPPP 910
PP P +PP PPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,020,175
Number of Sequences: 27780
Number of extensions: 249663
Number of successful extensions: 1703
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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