Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H24
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.2  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 330 LALDNVNGHGLSLTGTRIPGFGEQL 404
           LA+  +N H   + GTR+PG    L
Sbjct: 292 LAVVTLNLHHRGVRGTRVPGIVRSL 316


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 434  QQQPRPERQGVRDQELAP 487
            QQQP+P++Q  + Q+  P
Sbjct: 1526 QQQPQPQQQQQQQQQQQP 1543



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 434  QQQPRPERQGVRDQELAPAP 493
            QQQ +P++Q  + Q+  P P
Sbjct: 1512 QQQQQPQQQSQQPQQQQPQP 1531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,385
Number of Sequences: 438
Number of extensions: 3743
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)