Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H23
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0750 - 6315126-6315896,6316371-6316784                           31   1.2  
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.1  
11_04_0468 + 18059024-18059108,18059161-18059253,18059408-180596...    28   8.7  
02_04_0385 + 22514619-22514703,22514756-22514848,22515003-225152...    28   8.7  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    28   8.7  

>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +1

Query: 379 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDHINF-SAPKNAADII 552
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F + P++A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 553 NRWADEQTQGHIKTPVSXDKIXPATG 630
           N W  + T+G + T +    I   TG
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTG 172


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 361 TLEPPLPQGFPLSLPWTVHRLQTRNK 284
           +L PPLP G PLS P+     QT  K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776


>11_04_0468 +
           18059024-18059108,18059161-18059253,18059408-18059661,
           18059783-18059995,18060081-18060173,18060617-18060721,
           18060806-18061150
          Length = 395

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 234 DDKNVIASPL-GVMXXXXXXRVWSRCTVQGRDKGNPWGRGGSRVNTHIR 377
           DD  ++A  + G+       ++ +   V+ RD+GN  GRG  R+N   R
Sbjct: 35  DDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACR 83


>02_04_0385 +
           22514619-22514703,22514756-22514848,22515003-22515256,
           22515378-22515590,22515676-22515768,22516213-22516317,
           22516402-22516710,22517648-22517717,22518008-22518102,
           22519143-22519361
          Length = 511

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 234 DDKNVIASPL-GVMXXXXXXRVWSRCTVQGRDKGNPWGRGGSRVNTHIR 377
           DD  ++A  + G+       ++ +   V+ RD+GN  GRG  R+N   R
Sbjct: 35  DDNTLVADVVDGITQHGDHNQITNEGGVERRDRGNNMGRGLQRLNRACR 83


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +2

Query: 332 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 511
           K+  +G L +++   +  + + +N T  +  S  K   P S S   RSP +R  S  +  
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434

Query: 512 TLTSALRRMPLISSTVGRTN 571
                  ++ LIS    +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,096,533
Number of Sequences: 37544
Number of extensions: 481001
Number of successful extensions: 1167
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)