Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H23
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    40   0.003
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    40   0.003
AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical ...    29   5.8  
U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein ...    28   7.7  
AY525086-1|AAS13534.1|  199|Caenorhabditis elegans serine or cys...    28   7.7  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
 Frame = +1

Query: 301 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 474
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 475 -SRTANLFRSEVDHINFSAPKNAADIINRWADEQTQGHIKTPVSXDKI 615
            +    L+ +    +NF   + +A+ IN +  E T+GHIK  ++ D I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
 Frame = +1

Query: 301 AGAQSKEEIREILGGGEAQEST--HTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 474
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 475 -SRTANLFRSEVDHINFSAPKNAADIINRWADEQTQGHIKTPVSXDKI 615
            +    L+ +    +NF   + +A+ IN +  E T+GHIK  ++ D I
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159


>AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical
           protein T28F2.4a protein.
          Length = 748

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 84  TVMDKLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 263
           T  DK      LV   +    FG+ FS  RLG+ ++K  L+    + N+A  KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377


>U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein 8
           protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
 Frame = +1

Query: 280 FPCYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYA-EFDPKFLTVANKIYVSD 450
           +  YE+  G +++ +I + L     + +  TH   +     A + DP+ + + N I   +
Sbjct: 38  YSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ-VKICNHIICRN 95

Query: 451 QYKLAD-AFSRTANLFRSEVDHINFSAPKNAADIINRWADEQTQGHIK---TPVSXDK 612
             K       +   L+  EV   +    K     IN+   E T GHIK   T +S DK
Sbjct: 96  GIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDK 153


>AY525086-1|AAS13534.1|  199|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 199

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
 Frame = +1

Query: 280 FPCYESGAGAQSKEEIREIL--GGGEAQESTHTYGLLNQRYA-EFDPKFLTVANKIYVSD 450
           +  YE+  G +++ +I + L     + +  TH   +     A + DP+ + + N I   +
Sbjct: 37  YSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ-VKICNHIICRN 94

Query: 451 QYKLAD-AFSRTANLFRSEVDHINFSAPKNAADIINRWADEQTQGHIK---TPVSXDK 612
             K       +   L+  EV   +    K     IN+   E T GHIK   T +S DK
Sbjct: 95  GIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDK 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,976,672
Number of Sequences: 27780
Number of extensions: 384290
Number of successful extensions: 889
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)