Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H21
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366...    34   0.13 
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222...    32   0.69 

>03_05_0325 + 23135816-23135894,23136161-23136333,23136440-23136613,
            23136881-23137004,23137090-23137190,23137337-23137423,
            23137801-23137896,23138209-23138329,23138475-23138603,
            23139458-23139549,23139660-23139771,23140189-23140541,
            23140670-23140899,23141179-23141278,23143357-23143411,
            23143548-23145496,23145587-23145745,23146514-23146685,
            23146758-23147056,23147246-23147521
          Length = 1626

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 403  NALRKFTNVTASMPGYGWKNHCQGLPCLILAAA-KFHCETS--ARLFDSISSKQNCVLSA 573
            N+ +K  +    +PG G++ HC+G   ++LAA  KF  E      L D  SSK N ++ A
Sbjct: 1156 NSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKFIDERGCIVPLDDKTSSKLNDIIKA 1215


>12_02_0932 +
           24519204-24519380,24520074-24520128,24520251-24522202,
           24522288-24522446,24522878-24523049,24523131-24523429,
           24524037-24524285
          Length = 1020

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 403 NALRKFTNVTASMPGYGWKNHCQGLPCLILAAA-KFHCETSA 525
           N+ +K   V   +PG G + HC+G   ++LAA  KF  ET A
Sbjct: 559 NSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGA 600


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,533,794
Number of Sequences: 37544
Number of extensions: 316131
Number of successful extensions: 766
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)