Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H20
(870 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A... 97 4e-21
SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B sub... 94 2e-20
SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2... 92 8e-20
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.65
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.86
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.5
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.5
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 3.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.6
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 4.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 4.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 6.1
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 26 8.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 8.0
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 26 8.0
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.0
>SPBP8B7.06 |rpp201|rpp2, rpp2-1|60S acidic ribosomal protein P2A
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 96.7 bits (230), Expect = 4e-21
Identities = 40/69 (57%), Positives = 60/69 (86%)
Frame = +2
Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 307
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIEA+ E+++ +I ELNGKD+++LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60
Query: 308 KLSSMPVGG 334
KL+++P GG
Sbjct: 61 KLATVPTGG 69
>SPBC23G7.15c |rpp202|rpp2-2|60S acidic ribosomal protein P2B
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 94.3 bits (224), Expect = 2e-20
Identities = 40/69 (57%), Positives = 60/69 (86%)
Frame = +2
Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 307
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIEA+ E+++ +I+ELNGK++E+LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60
Query: 308 KLSSMPVGG 334
KLS++P G
Sbjct: 61 KLSTVPSAG 69
>SPAC1071.08 |rpp203|rpp2-3, rla6|60S acidic ribosomal protein P2C
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 110
Score = 92.3 bits (219), Expect = 8e-20
Identities = 38/69 (55%), Positives = 60/69 (86%)
Frame = +2
Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 307
M+Y+AAYLL +GGK +P+A+D+E +LS+VGIE++ E+++ +I EL+GKD+++LIAAG E
Sbjct: 1 MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60
Query: 308 KLSSMPVGG 334
KL+++P GG
Sbjct: 61 KLATVPSGG 69
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 560 PXPXPPXPPPPXXXPXXPXTXGPPXP 637
P P PP PPPP P T P P
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +2
Query: 557 APXPXPPXPPPPXXXPXXPXTXGPPXPPLXRVTWIXXMIXYXDXXWPPPPTXXP 718
AP P P P P P P PP R + D W P P
Sbjct: 894 APIPAPVAEPAPPAAPAKEVVEKAPSPPATRPKSTTPQ-KFDDDAWANKPVTEP 946
Score = 24.6 bits (51), Expect(3) = 0.11
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +3
Query: 567 PXPPPPXPPXPXXPXXVPPAXRXPL 641
P P PP PP P P + P+
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPM 258
Score = 23.0 bits (47), Expect(3) = 0.11
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 564 PPXPPPPXP 590
PP PPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 21.0 bits (42), Expect(3) = 0.11
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 741 VNXXXPXXLIXXPPITXPXPXSPPT 815
VN I PP T P PPT
Sbjct: 263 VNNLGSQVNIPPPPATPSQPPRPPT 287
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.65
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +2
Query: 557 APXPXPP---XPPPPXXXPXXPXTXGPPXPPL 643
AP P PP PPPP P P PPL
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.86
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 558 LXPPXPPPPXPPXPXXPXXVPPAXRXP 638
L P PPPP PP P PP P
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 554 LAPXPXPPXPPPPXXXPXXPXTXGPPXPP 640
L P PP PPPP P + PP PP
Sbjct: 4 LPPGNPPPPPPPPGFEPP---SQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 566 PXPPXPPPPXXXPXXPXTXGPPXPP 640
P P PPPP P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 6/34 (17%)
Frame = +2
Query: 557 APXPXPP------XPPPPXXXPXXPXTXGPPXPP 640
AP P PP PPPP P PP PP
Sbjct: 747 APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 572 PPXPPPPXXXPXXPXTXGPPXP 637
PP PPPP P PP P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 575 PXPPPPXXXPXXPXTXGPPXPP 640
P P P P P GPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPP 765
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 572 PPXPPPPXXXPXXPXTXGPPXPP 640
PP PPPP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 264 SSVITFLSFSPSASIP--TELRIFSTSAAAGVVLPPSTASKYAAT 136
SSV T LS S S+SIP + STS ++ V+P S++S +++
Sbjct: 8 SSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSS 52
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 572 PPXPPPPXXXPXXPXTXGPPXPP 640
PP P PP P P + P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 336 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSP----SASIPTELRIFSTSAAAGVVL 169
PPP SFS I+ ++ +P SS T + SP S+ +P+ + I S S ++ VL
Sbjct: 190 PPPASSTSSFS---TITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSV-ISSASLSSSSVL 245
Query: 168 PPS 160
P S
Sbjct: 246 PTS 248
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 279 TSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKY 145
+ L + S T +S S S+PT+ + T + + V PPS S Y
Sbjct: 526 SKLSVESDETAVSASSGESVPTDSTLTDTKSKSVFVHPPSPQSLY 570
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -3
Query: 640 RGXRXAGGTXXGXXGXGGXGG--GGXGGXS 557
RG GG G GG GG GG GG S
Sbjct: 32 RGGARGGGRGGARGGRGGRGGARGGRGGSS 61
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 125 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQ 286
K+R + + L ++T + E+ + G+E+ G+K K ++ E NGK +++
Sbjct: 1323 KVRRIKPCTIESLFNESTLRSGKAERFSENAGVESIGKKGKNLLNESGNGKKLDK 1377
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.0 bits (47), Expect(2) = 4.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 564 PPXPPPPXP 590
PP PPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 558 LXPPXPPPP 584
L PP PPPP
Sbjct: 305 LPPPPPPPP 313
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 557 APXPXPPXPPPPXXXPXXPXTXGPPXPP 640
AP PP P P P P G P P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +2
Query: 572 PPXPPPPXXXPXXPXTXG-PPXPP 640
PP PPP P + G PP PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 557 APXPXPPXPPPPXXXPXXPXTXGPPXPP 640
AP PP P P P P G P P
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
Frame = +3
Query: 564 PPXPPP-PXPPXPXXPXXVPP 623
PP PPP PP P VPP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPP 1209
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -1
Query: 279 TSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT 136
T LP ++V T SFS SAS T +++ +V PPST+ T
Sbjct: 37 TPLPSANVTT-TSFS-SASTETSTHSVTSTNITSIVPPPSTSHNSTTT 82
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 294 AISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 151
++S S+ L S++ T S +AS+PT I S S P+T+S
Sbjct: 79 SLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSS 126
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 558 LXPPXPPPPXPPXPXXPXXVPP 623
+ P PPPP P P PP
Sbjct: 1 MAPAPPPPPPAPAPAAAAPAPP 22
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 25.8 bits (54), Expect = 8.0
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +3
Query: 123 KKCVTWPRIYWLCWV 167
+K +W RI+W+C++
Sbjct: 299 EKAESWKRIFWMCYI 313
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 123 KKCVTWPRIYWLCWVARPRQLPLTLRRSSAPSVSKLTVRSLRK*SLSST 269
KK + + +I W WV R +P S PS S L SLS++
Sbjct: 161 KKGIQFEKIGWGRWVLRDSTIPANSHPQSLPSNSIPKTEPLDTPSLSNS 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,611,588
Number of Sequences: 5004
Number of extensions: 46161
Number of successful extensions: 369
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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