Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H17
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 6e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 7e-04
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 34 0.035
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 33 0.046
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.43
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 7.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 9.2
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 9.2
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 43.6 bits (98), Expect = 4e-05
Identities = 40/163 (24%), Positives = 45/163 (27%), Gaps = 9/163 (5%)
Frame = +2
Query: 221 KXXXNKXXDPXXXVAPPPPPPAXXXXLSPXXXXXXLXGXXXP-PPRPXGXXXXPPXXPXG 397
K N+ + PP PP+ P P PP G PP P
Sbjct: 214 KAYLNESAGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPR 273
Query: 398 AXXRXRGGPXXXRAXKXXPPPPPPPFXXPXGG--------GPXPXPXPXHXPPPXXGGGG 553
P K PP PPP P P P + P G G
Sbjct: 274 PIAPVSMNPAINSTSK--PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGS 331
Query: 554 GXXXXPPPPPXPXNTXXXXXXXXXXXXXXXPPPXXPGPPXPPP 682
PPPPP P + PP PP PPP
Sbjct: 332 SNSSLPPPPPPPRSN--------AAGSIPLPPQGRSAPPPPPP 366
Score = 41.9 bits (94), Expect = 1e-04
Identities = 35/146 (23%), Positives = 37/146 (25%), Gaps = 6/146 (4%)
Frame = +2
Query: 266 PPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXPPXXPXGAXXRXRGGPXXXRAXK 445
PPPPPP S PPPR P P + P A
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP-PLSSSRAVSNPPAPPPAIP 396
Query: 446 XXPPPPPPPFXXPXGGGPXPXPXPXHXPP------PXXGGGGGXXXXPPPPPXPXNTXXX 607
P PP P P P PP P P PP P +
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 608 XXXXXXXXXXXXPPPXXPGPPXPPPP 685
PP P PP P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 40.7 bits (91), Expect = 3e-04
Identities = 39/152 (25%), Positives = 42/152 (27%), Gaps = 9/152 (5%)
Frame = +2
Query: 263 APPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPX------GXXXXPPXXPXGAXXRXRGGP 424
+PP PP +S PPP P P R RG P
Sbjct: 266 SPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKP 325
Query: 425 XXXR--AXKXXPPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXPXNT 598
+ PPPPPPP G P P PPP PPP
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP------- 378
Query: 599 XXXXXXXXXXXXXXXPPPXXPGPPXPP-PPXG 691
PPP PG P PP G
Sbjct: 379 ---LSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Score = 39.1 bits (87), Expect = 0.001
Identities = 35/123 (28%), Positives = 37/123 (30%), Gaps = 9/123 (7%)
Frame = +2
Query: 248 PXXXVAPPPPPPAXXXXLS----PXXXXXXLXGXXXPPPRPXGXXXXPPXXPXGAXXRXR 415
P APPPPPP P + PPP G P P G R
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA-PALPPLGNASRTS 413
Query: 416 GGPXXXR-AXKXXPPPPPPPFXXPX--GGGPXPXPXPXHXP--PPXXGGGGGXXXXPPPP 580
P + PP PP P G P P P P PP G PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 581 PXP 589
P P
Sbjct: 474 PAP 476
Score = 29.1 bits (62), Expect = 0.99
Identities = 25/97 (25%), Positives = 26/97 (26%), Gaps = 7/97 (7%)
Frame = +2
Query: 266 PPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXPPXXPXGAXXRXRGGPXXXRAXK 445
PP PPPA +P PP P P P P A
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 446 XXPPPPP--PPFXXPXGGGPX-----PXPXPXHXPPP 535
PP P PP P P P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 6e-05
Identities = 31/91 (34%), Positives = 34/91 (37%)
Frame = +2
Query: 263 APPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXPPXXPXGAXXRXRGGPXXXRAX 442
+PPPPPPA + P + PPP P PP P G GP
Sbjct: 731 SPPPPPPAV---IVPTPAPAPIP---VPPPAPIMGGPPPPPPPPGVAG---AGP------ 775
Query: 443 KXXPPPPPPPFXXPXGGGPXPXPXPXHXPPP 535
PPPPPPP GG P P P P
Sbjct: 776 ---PPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 42.7 bits (96), Expect = 8e-05
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 452 PPPPPPPFXXPXGG-GPXPXPXPXHX-----PPPXXGGGGGXXXXPPPPPXP 589
PPPPPP P P P P P PPP G G PPPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXP 589
PPPPPPP G GP P P PPP GG P P P
Sbjct: 761 PPPPPPP-PGVAGAGPPPPP----PPPPAVSAGGSRYYAPAPQAEP 801
Score = 32.3 bits (70), Expect = 0.11
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +1
Query: 526 PPPXPXGGGGGXXXXPPPPXPXXHPXXXGXRAGAGXXXXPPPPXA 660
PPP P GG PPPP P AGAG PPPP A
Sbjct: 752 PPPAPIMGG----PPPPPPPPGV--------AGAGPPPPPPPPPA 784
Score = 31.1 bits (67), Expect = 0.25
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 572 PPPPXPXNTXXXXXXXXXXXXXXXPPPXXPGPPXPPPPXG 691
PPPP P P P GPP PPPP G
Sbjct: 732 PPPPPP--AVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 526 PPPXPXGGGGGXXXXPPPPXPXXHPXXXGXRAGAGXXXXPPPPXAGXPXPPPP 684
PPP P P P P P G PPPP PPPP
Sbjct: 732 PPPPPPA------VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 526 PPPXPXGGGGGXXXXPPPPXPXXHPXXXGXRAGAGXXXXPPPP 654
PPP P G PPPP P G R A P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -1
Query: 629 PAPARX-PXXXGCXXGXGGGGXXXXPPPPPXGXGGG 525
PAP P G G G PPPPP GG
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 41.1 bits (92), Expect = 2e-04
Identities = 31/82 (37%), Positives = 32/82 (39%)
Frame = -3
Query: 588 GXGGGGGXXXXPPPPPXXGGGXWXGXGXGXGPPPXGXXKGGGGGGGXXXXARXXXGPPRX 409
G GG GG PPP P GG + G G G G G GGG GG G P
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGG-FGGFG-GEGHHHGGHGGFGGGPGGFEGGPGGFGGGP-- 244
Query: 408 RXXAPXGXXGGXXXXPXGRGGG 343
G GG P G GGG
Sbjct: 245 --GGFGGGLGGFGGGPGGFGGG 264
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = -3
Query: 681 GGGXGGPGXXGGGXXXXXXXXXXXXXXXVXXGXGGGGGXXXXPPPPPXXGGGXWXGXGXG 502
GGG GGP GG G GGG G P G G + G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 501 XGPPPXGXXKGGGGGGG 451
G P G G GG GG
Sbjct: 254 FGGGPGGFGGGPGGHGG 270
Score = 34.7 bits (76), Expect = 0.020
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = -3
Query: 531 GGXWXGXGXG-XGPPPXGXXKGGGGGGGXXXXARXXXGPPRXRXXAPXGXXGGXXXXPXG 355
GG + G G G GPPP GG GG G G G GG P G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 354 RGGG 343
GGG
Sbjct: 247 FGGG 250
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 7e-04
Identities = 41/157 (26%), Positives = 45/157 (28%), Gaps = 12/157 (7%)
Frame = +2
Query: 248 PXXXVAPPPPPPAXXXXL---SPXXXXXXLXGXXXPP-PRPXGXXXXP-PXXPXGAXXRX 412
P APP P P+ + S PP P P G P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 413 RGGPXXXRAXKXXPPPPPP----PFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPP- 577
G P + PP P P P P P P P P PP G PPP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 578 --PPXPXNTXXXXXXXXXXXXXXXPPPXXPGPPXPPP 682
PP P + P P PP P P
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 36.7 bits (81), Expect = 0.005
Identities = 36/150 (24%), Positives = 38/150 (25%), Gaps = 7/150 (4%)
Frame = +2
Query: 263 APPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXP-PXXPXGAXXRXRGGPXXXRA 439
AP PPP S P P P G P P + A
Sbjct: 1059 APSAPPPVPAP--SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 440 XKXXPPPPPPPFXXPX---GGGPXPXPXPXHXPPPXXGGGGGXXXXPPP---PPXPXNTX 601
PP P P P G P P P PP G P PP P +
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 602 XXXXXXXXXXXXXXPPPXXPGPPXPPPPXG 691
PP PP P P G
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 36.7 bits (81), Expect = 0.005
Identities = 35/144 (24%), Positives = 37/144 (25%), Gaps = 1/144 (0%)
Frame = +2
Query: 248 PXXXVAPPPPPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXPPXX-PXGAXXRXRGGP 424
P V P P P P + PP P PP P GA + P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK--P 1164
Query: 425 XXXRAXKXXPPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXPXNTXX 604
P PP P G P P P P PP G PP P T
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVP-PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Query: 605 XXXXXXXXXXXXXPPPXXPGPPXP 676
PP P P
Sbjct: 1224 AGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 33.1 bits (72), Expect = 0.061
Identities = 37/149 (24%), Positives = 40/149 (26%), Gaps = 8/149 (5%)
Frame = +2
Query: 263 APPPPPPAXXXXLSPXXXXXXLXGXXXPPPR--PXGXXXXPPXXPXGAXXRXRGGPXXXR 436
A P P A P L PP+ P P A R P
Sbjct: 958 ASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKL 1017
Query: 437 AXKXXPPPPP----PPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXPXNTXX 604
+ K P P P PP P P P P PP G PPP P P +
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTA--PPVPIPTSTPPVPKSSSGA-PSAPPPVPAPSSEIP 1074
Query: 605 XXXXXXXXXXXXXPP--PXXPGPPXPPPP 685
P P P P PP
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 26.2 bits (55), Expect = 7.0
Identities = 24/112 (21%), Positives = 26/112 (23%)
Frame = +2
Query: 347 PPRPXGXXXXPPXXPXGAXXRXRGGPXXXRAXKXXPPPPPPPFXXPXGGGPXPXPXPXHX 526
PP P P P + A P P P G P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 527 PPPXXGGGGGXXXXPPPPPXPXNTXXXXXXXXXXXXXXXPPPXXPGPPXPPP 682
PP PP P + P P PP P P
Sbjct: 1092 PPVPKPSVAA-------PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.9 bits (74), Expect = 0.035
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Frame = +2
Query: 461 PPPPFXXPXGGGPXPXPXPX----HXPPPXXGGGGGXXXXPPPPPXPXNTXXXXXXXXXX 628
PPPP G P P H PPP G PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 629 XXXXXPPP---XXPGPPXPPPP 685
PPP PG PPPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPP 315
Score = 30.7 bits (66), Expect = 0.32
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 17/121 (14%)
Frame = +2
Query: 266 PPPPPPAXXXXLSPXXXXXXLXGXXXPPP---RPXGXXXXPPXXPXGAXXRXRGGPXXXR 436
PPPP P G PPP G PP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 437 AXKXXPPPP----------PPPFXXPXGGGPXPXPXPX----HXPPPXXGGGGGXXXXPP 574
+ PPPP PPP G P P H PPP G PP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 575 P 577
P
Sbjct: 328 P 328
Score = 30.7 bits (66), Expect = 0.32
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 17/121 (14%)
Frame = +2
Query: 266 PPPPPPAXXXXLSPXXXXXXLXGXXXPPP---RPXGXXXXPPXXPXGAXXRXRGGPXXXR 436
PPPP P G PPP G PP P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 437 AXKXXPPPP----------PPPFXXPXGGGPXPXPXPX----HXPPPXXGGGGGXXXXPP 574
+ PPPP PPP G P P H PPP G PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Query: 575 P 577
P
Sbjct: 341 P 341
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Frame = +2
Query: 521 HXPPPXXGGGGGXXXXPPPPPXPXNTXXXXXXXXXXXXXXXPPP---XXPGPPXPPPP 685
H PPP G PPP PPP PG PPPP
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +2
Query: 455 PPPPPPFXXPXGGGPXPXP---XPXHXPPPXXGGGGGXXXXPPPPP 583
PPPPPP P G P P P PP G P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXP 589
PPPPPPP P P P G PPPP P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSR----NVNNLGSQVNIPPPPATP 279
Score = 29.5 bits (63), Expect = 0.75
Identities = 38/148 (25%), Positives = 40/148 (27%), Gaps = 3/148 (2%)
Frame = +2
Query: 248 PXXXVAPPP---PPPAXXXXLSPXXXXXXLXGXXXPPPRPXGXXXXPPXXPXGAXXRXRG 418
P V+PPP PP A S L PPP P PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATS-------LPSDYNPPPPP------PPPPAVEDQAADAN 207
Query: 419 GPXXXRAXKXXPPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPPXPXNT 598
P + P PP P P P P P PPP P P N
Sbjct: 208 EPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPP--PPPTLPPQSTNTSQLPMPSRNVNN 265
Query: 599 XXXXXXXXXXXXXXXPPPXXPGPPXPPP 682
PPP P P PP
Sbjct: 266 LGSQVNIP-------PPPATPSQPPRPP 286
Score = 29.5 bits (63), Expect = 0.75
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Frame = +2
Query: 236 KXXDPXXXVAPPPPP--PAXXXXLS----PXXXXXXLXGXXXPPPRPXGXXXXPPXXPXG 397
K DP PPPPP P S P L PP P PP P
Sbjct: 230 KQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPP-PPATPSQPPRPPTN 288
Query: 398 AXXRXRGGPXXXRAXKXXPPPPPPP 472
A R G PP P P
Sbjct: 289 ASTRSTGTSSSMAHSYDSPPSPSSP 313
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGG--GGGXXXXPPPP 580
PP P P P P P P PPP G PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +2
Query: 377 PPXXPXGAXXRXRGGPXXXRAXKXXPPPP--PPPFXXPXGGGPXPXPXPXHXPPPXXG 544
PP P A P PPPP PP P P P P P G
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 571 PPPPXPXXHPXXXGXRAGAGXXXXPPPPXAGXPXPPPP 684
PPPP P AG PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.43
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXP 511
PPPPPPP P P P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXH 523
PPPPPPP P P P P +
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 515 PXHXPPPXXGGGGGXXXXPPPPPXP 589
P + PPP G PPPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXHXPPP 535
PP PPP P G P P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP--PPPP 30
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 434 RAXKXXPPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGG 556
RA PPP P F GGG P H P GG GG
Sbjct: 94 RAYYAPPPPRGPLFGPRIGGG---HHGPLHGPHGGFGGRGG 131
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.0
Identities = 20/80 (25%), Positives = 20/80 (25%), Gaps = 2/80 (2%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXPXPXHXPPPXXGGGGGXXXXPPPPP--XPXNTXXXXXXXXX 625
P P PP P P PPP PP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 626 XXXXXXPPPXXPGPPXPPPP 685
P P PP PPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPP 204
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 455 PPPPPPFXXPXGGGPXP 505
PPPPPP P P P
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 452 PPPPPPPFXXPXGG 493
PPPPPPP GG
Sbjct: 947 PPPPPPPLVSAAGG 960
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 452 PPPPPPPFXXPXGGGPXPXP 511
PPPPPPP GG P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 455 PPPPPPFXXPXGGGPXPXPXPXHXPPP 535
PPPPPP P P P P P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 9.2
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = -3
Query: 510 GXGXGPPPXGXXKGGGGG-GGXXXXARXXX-GPPRXRXXAPXGXXGGXXXXPXGRGG 346
G G G GG GG GG AR G R G GG GRGG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -3
Query: 552 PPPPXXGGGXWXGXGXGXGPPPXGXXK---GGGGGGG 451
PPPP GG G G G P G GG GG
Sbjct: 76 PPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGG 112
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,857,108
Number of Sequences: 5004
Number of extensions: 38070
Number of successful extensions: 505
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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