Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H15
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   124   5e-30
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  124 bits (298), Expect = 5e-30
 Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
 Frame = +3

Query: 78  NILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCI 257
           ++ Q I +  +++K  KL  +L          T++F+ETKR  D +   M    +P   I
Sbjct: 397 DVEQTIHLVEKFKKRKKLEEILN---GGNPKGTLVFVETKRNADYLASLMSETQFPTTSI 453

Query: 258 HGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGX 437
           HGD  Q ER+  L DF+SG+  +L+AT VAARGLD+ +V  V+N+D P   +DYVHRIG 
Sbjct: 454 HGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGR 513

Query: 438 XGXXNKTGTAYTFFTP-SNAAKASDLISVLXXAXPS 542
            G     G A +F+ P ++ A ASDL+ +L  A  S
Sbjct: 514 TGRVGNKGRATSFYDPEADRAMASDLVKILTQAGQS 549


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 157 AMISFNRVLSLVSFSYSXHTSIICNIL 77
           ++ISF+  LS +SF+Y+   S +  +L
Sbjct: 745 SVISFSHSLSPISFNYTLSNSSLSRVL 771


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,411
Number of Sequences: 2352
Number of extensions: 6872
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)