Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H15
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 244 9e-65
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 121 6e-28
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 119 2e-27
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 117 1e-26
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 117 1e-26
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 117 1e-26
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 117 1e-26
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 117 1e-26
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 109 3e-24
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 106 2e-23
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 106 2e-23
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 105 4e-23
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 105 4e-23
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 105 4e-23
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 105 4e-23
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 103 2e-22
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 103 2e-22
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 99 2e-21
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 99 2e-21
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 98 8e-21
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 96 3e-20
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 91 9e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 91 9e-19
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 87 2e-17
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 85 5e-17
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 83 3e-16
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 81 8e-16
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 81 8e-16
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 78 7e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 69 4e-12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 4e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 65 7e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 63 3e-10
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 62 7e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 62 7e-10
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 58 8e-09
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 55 8e-08
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 52 4e-07
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 52 7e-07
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 51 1e-06
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 51 1e-06
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 44 2e-04
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 44 2e-04
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 39 0.005
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 38 0.007
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 38 0.007
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 36 0.028
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.087
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 35 0.087
AF040653-5|AAB95026.1| 491|Caenorhabditis elegans F-box b prote... 34 0.11
Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical pr... 33 0.20
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 33 0.35
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 30 2.5
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical ... 29 5.7
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 244 bits (596), Expect = 9e-65
Identities = 107/161 (66%), Positives = 134/161 (83%)
Frame = +3
Query: 51 GSLQLAANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMK 230
GSL+LAANHNI Q++D+ E+ K+ KL LL IM +KE KTIIF+ETKR+ D++TR M+
Sbjct: 338 GSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMR 397
Query: 231 RDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHS 410
RDGWP +CIHGD +Q ERDWVLQ+F++GK PI++ATDVAARGLDVDD+KFVIN+DYP++S
Sbjct: 398 RDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNS 457
Query: 411 EDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
EDYVHRIG G +K GTAYTFFT +NA+KA DL+ VL A
Sbjct: 458 EDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEA 498
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 121 bits (292), Expect = 6e-28
Identities = 67/156 (42%), Positives = 90/156 (57%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWP 245
+ + NI+Q I E EK + L LL + T++F+ETKR D+ + R +
Sbjct: 396 STSENIMQKIVWVEEDEKRSYLMDLLDA--TGDSSLTLVFVETKRGASDLAYYLNRQNYE 453
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
V IHGD Q ER+ L FR+G APILVAT VAARGLD+ +VK VIN+D PS ++YVH
Sbjct: 454 VVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVH 513
Query: 426 RIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
RIG G G A +FF N A +L+ ++ A
Sbjct: 514 RIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEA 549
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 119 bits (287), Expect = 2e-27
Identities = 59/142 (41%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Frame = +3
Query: 78 NILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVC- 254
+I Q +C E++K KL LL M +E +I+F++ + + DDI ++ R G+ +V
Sbjct: 524 DITQNAVICAEHQKFLKLLELLG--MYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAP 581
Query: 255 IHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
+HG Q++RD + DF++G +LVAT VAARGLDV ++ V+N+D P+H EDYVHR+G
Sbjct: 582 LHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVG 641
Query: 435 XXGXXNKTGTAYTFFTPSNAAK 500
G + G AYTF P + K
Sbjct: 642 RTGRAGRKGYAYTFVLPEHQEK 663
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 117 bits (281), Expect = 1e-26
Identities = 49/116 (42%), Positives = 76/116 (65%)
Frame = +3
Query: 171 KTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAA 350
+ +IF T+R+VD +T KM + + C+HGD Q ERD ++++FRSG + +L+ TD+ A
Sbjct: 270 QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 329
Query: 351 RGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLIS 518
RG+DV V VIN+D PS+ E+Y+HRIG G + G A F T ++A + ++ S
Sbjct: 330 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 117 bits (281), Expect = 1e-26
Identities = 49/116 (42%), Positives = 76/116 (65%)
Frame = +3
Query: 171 KTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAA 350
+ +IF T+R+VD +T KM + + C+HGD Q ERD ++++FRSG + +L+ TD+ A
Sbjct: 270 QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 329
Query: 351 RGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLIS 518
RG+DV V VIN+D PS+ E+Y+HRIG G + G A F T ++A + ++ S
Sbjct: 330 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 385
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 117 bits (281), Expect = 1e-26
Identities = 63/153 (41%), Positives = 89/153 (58%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWP 245
+ + NI Q + E EK + L +L EN ++F+ETKR +++ + R
Sbjct: 367 STSENIEQRLLWVNEMEKRSNLMEILMN--EHSENLVLVFVETKRGANELAYFLNRQQIR 424
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
+V IHGD Q ER+ L+ FRSG+ PILVAT VAARGLD+ +V+ VIN+D P S++YVH
Sbjct: 425 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
Query: 426 RIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
RIG G G A +FF N DL +++
Sbjct: 485 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLI 517
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 117 bits (281), Expect = 1e-26
Identities = 63/153 (41%), Positives = 89/153 (58%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWP 245
+ + NI Q + E EK + L +L EN ++F+ETKR +++ + R
Sbjct: 351 STSENIEQRLLWVNEMEKRSNLMEILMN--EHSENLVLVFVETKRGANELAYFLNRQQIR 408
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
+V IHGD Q ER+ L+ FRSG+ PILVAT VAARGLD+ +V+ VIN+D P S++YVH
Sbjct: 409 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
Query: 426 RIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
RIG G G A +FF N DL +++
Sbjct: 469 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLI 501
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 117 bits (281), Expect = 1e-26
Identities = 63/153 (41%), Positives = 89/153 (58%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWP 245
+ + NI Q + E EK + L +L EN ++F+ETKR +++ + R
Sbjct: 348 STSENIEQRLLWVNEMEKRSNLMEILMN--EHSENLVLVFVETKRGANELAYFLNRQQIR 405
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
+V IHGD Q ER+ L+ FRSG+ PILVAT VAARGLD+ +V+ VIN+D P S++YVH
Sbjct: 406 SVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
Query: 426 RIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
RIG G G A +FF N DL +++
Sbjct: 466 RIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLI 498
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein
F01F1.7 protein.
Length = 730
Score = 109 bits (261), Expect = 3e-24
Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +3
Query: 87 QIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGD 266
Q++ + E K KL +L+ ++ + IIF+ K+ D +++ + + G+ +HG
Sbjct: 550 QVVYMVPEDRKRKKLVEVLE---SQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGG 606
Query: 267 XSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGX 446
Q++R++ LQ + G + ILVATDVA RG+DV DV V+N+D EDY HRIG G
Sbjct: 607 KGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGR 666
Query: 447 XNKTGTAYTFFTPSNAAKASDLISVLXXA-XPSCNP 551
K G A TF TP + A DL VL + SC P
Sbjct: 667 AGKHGKAITFLTPDDTAVYFDLKQVLVESPVSSCPP 702
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 106 bits (254), Expect = 2e-23
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKE-----NKTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL LL EK KT++F+ + D +
Sbjct: 564 AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLA 623
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 624 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G +G A T F + + S+L+ VL A
Sbjct: 684 PDNIDDYIHRIGRTGRVGNSGRA-TSFISEDCSLLSELVGVLADA 727
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 106 bits (254), Expect = 2e-23
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKE-----NKTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL LL EK KT++F+ + D +
Sbjct: 564 AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLA 623
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 624 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G +G A T F + + S+L+ VL A
Sbjct: 684 PDNIDDYIHRIGRTGRVGNSGRA-TSFISEDCSLLSELVGVLADA 727
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 105 bits (252), Expect = 4e-23
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKEN-----KTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL +L EK + KTI+F+ + D +
Sbjct: 775 AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLA 834
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 835 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G G A T F + S+L+ VL A
Sbjct: 895 PDNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDA 938
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 105 bits (252), Expect = 4e-23
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKEN-----KTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL +L EK + KTI+F+ + D +
Sbjct: 775 AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLA 834
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 835 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G G A T F + S+L+ VL A
Sbjct: 895 PDNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDA 938
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 105 bits (252), Expect = 4e-23
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKE-----NKTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL LL EK KT++F+ + D +
Sbjct: 564 AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADILA 623
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 624 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 683
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G +G A T F + + S+L+ VL A
Sbjct: 684 PDNIDDYIHRIGRTGRVGNSGRA-TSFISEDCSLLSELVGVLADA 727
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 105 bits (252), Expect = 4e-23
Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKEN-----KTIIFIETKRRVDDIT 218
AAN +LQ + C EK+ KL +L EK + KTI+F+ + D +
Sbjct: 775 AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLA 834
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
+ PA+ IHG Q ER L+ FR+G P+L+AT VA RGLD+ V VIN+D
Sbjct: 835 SILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDM 894
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVLXXA 533
P + +DY+HRIG G G A T F + S+L+ VL A
Sbjct: 895 PDNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDA 938
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 103 bits (247), Expect = 2e-22
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +3
Query: 117 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVL 296
+E K TL+ + ++F T+R+VD +T KMK + +HGD Q +RD V+
Sbjct: 249 EEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVM 308
Query: 297 QDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTF 476
++FR+G +L++TDV ARGLDV V VIN+D P++ E Y+HRIG G + G A F
Sbjct: 309 KEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 368
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 103 bits (247), Expect = 2e-22
Identities = 49/120 (40%), Positives = 72/120 (60%)
Frame = +3
Query: 117 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVL 296
+E K TL+ + ++F T+R+VD +T KMK + +HGD Q +RD V+
Sbjct: 249 EEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVM 308
Query: 297 QDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTF 476
++FR+G +L++TDV ARGLDV V VIN+D P++ E Y+HRIG G + G A F
Sbjct: 309 KEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 368
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 99 bits (238), Expect = 2e-21
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKEN-----KTIIFIETKRRVDDIT 218
AAN ++Q ++C K KL LL EK + KTI+F+ ++ D +
Sbjct: 521 AANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLA 580
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
M PA+ IHG Q ER L+ FRSG P+L+AT V RGLD+ V VIN+D
Sbjct: 581 SIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDM 640
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFT 482
P++ +DY+HRIG G +G A +F +
Sbjct: 641 PNNIDDYIHRIGRTGRVGNSGRATSFIS 668
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 99 bits (238), Expect = 2e-21
Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLL----KEIMAEKEN-----KTIIFIETKRRVDDIT 218
AAN ++Q ++C K KL LL EK + KTI+F+ ++ D +
Sbjct: 521 AANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLA 580
Query: 219 RKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDY 398
M PA+ IHG Q ER L+ FRSG P+L+AT V RGLD+ V VIN+D
Sbjct: 581 SIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDM 640
Query: 399 PSHSEDYVHRIGXXGXXNKTGTAYTFFT 482
P++ +DY+HRIG G +G A +F +
Sbjct: 641 PNNIDDYIHRIGRTGRVGNSGRATSFIS 668
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 97.9 bits (233), Expect = 8e-21
Identities = 41/98 (41%), Positives = 63/98 (64%)
Frame = +3
Query: 225 MKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPS 404
M + + C+HGD Q ERD ++++FRSG + +L+ TD+ ARG+DV V VIN+D PS
Sbjct: 1 MTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPS 60
Query: 405 HSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLIS 518
+ E+Y+HRIG G + G A F T ++A + ++ S
Sbjct: 61 NRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES 98
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 97.5 bits (232), Expect = 1e-20
Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Frame = +3
Query: 69 ANHNILQIIDVCXEYEKETKLSTLLKEIMAEKE-NKTIIFIETKRRVDDITRKMKRDGWP 245
AN +I Q + V ++ KL L++ ++ K +IF+ K +D+ +K+K +
Sbjct: 480 ANADIEQKVFVMQN--QDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFD 537
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
V +HGD Q ER+ L FR K+ ILVATDVAARGLD+ +++ VINFD + +VH
Sbjct: 538 IVLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVH 596
Query: 426 RIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
RIG G GTAYT T + L+ L
Sbjct: 597 RIGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNL 629
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = +3
Query: 51 GSLQLAANHNILQIIDVCXEYEKETKLSTLLKEIMAE--KENKTIIFIETKRRVDDITRK 224
GSL L + ++ Q + + ++ ++ + A + K IIF+++K D ++
Sbjct: 298 GSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSD 357
Query: 225 MKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPS 404
G + +HG SQ++R+ L RSG+ ILVATD+A+RG+DV D+ V+N+D+P
Sbjct: 358 FCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPM 417
Query: 405 HSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
E+YVHR+G G + G A +F ++ + LI +L
Sbjct: 418 DIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQIL 457
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 96.3 bits (229), Expect = 3e-20
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Frame = +3
Query: 66 AANHNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWP 245
AA+ N+LQ ++ E KL +L E + + K +IF E K VD+I + G
Sbjct: 412 AASLNVLQELEFV---RSENKLVRVL-ECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVE 467
Query: 246 AVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVH 425
IHG Q++R ++ FR + +LVATDVA++GLD ++ VINFD P E+YVH
Sbjct: 468 VASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVH 527
Query: 426 RIGXXGXXNKTGTAYTFFT-PSNAAKASDLISVLXXA 533
RIG G + G A TF S + SDL +L A
Sbjct: 528 RIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEA 564
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 91.1 bits (216), Expect = 9e-19
Identities = 53/122 (43%), Positives = 66/122 (54%)
Frame = +3
Query: 117 KETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVL 296
KET L LL E N I+F T I +++ G AV +HG SQ +R L
Sbjct: 270 KETYLVYLLNE---HAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSL 326
Query: 297 QDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTF 476
F+S ILV TDVAARGLD+ V VIN+D PS S+DYVHR+G ++G A T
Sbjct: 327 NKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITV 386
Query: 477 FT 482
T
Sbjct: 387 VT 388
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 91.1 bits (216), Expect = 9e-19
Identities = 46/125 (36%), Positives = 70/125 (56%)
Frame = +3
Query: 108 EYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERD 287
E +K L+TL +++ N++IIF + +RV+ + +K+ G+ IH +QN R+
Sbjct: 264 EKQKVHCLNTLFRKLQI---NQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRN 320
Query: 288 WVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTA 467
V DFR G LV +D+ RG+D+ V VINFD+P ++E Y+HRIG G G A
Sbjct: 321 RVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVA 380
Query: 468 YTFFT 482
T
Sbjct: 381 INLIT 385
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 90.6 bits (215), Expect = 1e-18
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Frame = +3
Query: 114 EKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWV 293
EK KL +LK+ + K KTIIF++ K + D K+ G A +HGD SQ+ R+ +
Sbjct: 629 EKNAKLREILKQNVNGKTLKTIIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKL 688
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSED-----YVHRIGXXGXXNK- 455
+ DF+S + +LV TD+ +RG+DV D+ VINFD P D ++HR G G +
Sbjct: 689 INDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRK 748
Query: 456 -TGTAYTFFTPSN 491
G +F P +
Sbjct: 749 ENGLCVSFVDPQS 761
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/142 (32%), Positives = 74/142 (52%)
Frame = +3
Query: 75 HNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVC 254
H + Q E EK +L LL + + N+ +IF++ +R + + + + +P++
Sbjct: 256 HGLQQHYVKLKEAEKNRRLLNLLDAL---EFNQVVIFVKAVKRCEALHQLLTEQNFPSIA 312
Query: 255 IHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
IH +Q ER Q F+ + ILVATD+ RG+D++ V V N+D P S+ Y+HR+
Sbjct: 313 IHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVA 372
Query: 435 XXGXXNKTGTAYTFFTPSNAAK 500
G G A TF + N AK
Sbjct: 373 RAGRFGTKGLAITFVSDENDAK 394
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/142 (32%), Positives = 74/142 (52%)
Frame = +3
Query: 75 HNILQIIDVCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVC 254
H + Q E EK +L LL + + N+ +IF++ +R + + + + +P++
Sbjct: 248 HGLQQHYVKLKEAEKNRRLLNLLDAL---EFNQVVIFVKAVKRCEALHQLLTEQNFPSIA 304
Query: 255 IHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
IH +Q ER Q F+ + ILVATD+ RG+D++ V V N+D P S+ Y+HR+
Sbjct: 305 IHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVA 364
Query: 435 XXGXXNKTGTAYTFFTPSNAAK 500
G G A TF + N AK
Sbjct: 365 RAGRFGTKGLAITFVSDENDAK 386
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 85.4 bits (202), Expect = 5e-17
Identities = 42/108 (38%), Positives = 61/108 (56%)
Frame = +3
Query: 138 LLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGK 317
+++ I A + +K I+F TK++ D + ++++ A C+HGD S ER L+ F+ G
Sbjct: 496 VVRAIHALQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGI 555
Query: 318 APILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTG 461
LV +DV ARGLDV V FVI+ P YVHRIG G + G
Sbjct: 556 IRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERMG 603
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Frame = +3
Query: 114 EKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMK--RDGWPAVCIHGDXSQNERD 287
E+E K++ L I A ++ K+++F+ + ++ +T R G P + + G +Q +R
Sbjct: 303 EEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRI 362
Query: 288 WVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTA 467
F KA +L+ATDVA+RGLD + + +VI D P+ +DY+HR+G + +G +
Sbjct: 363 ETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNS 422
Query: 468 YTFFTPS 488
+PS
Sbjct: 423 LLMVSPS 429
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 81.4 bits (192), Expect = 8e-16
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = +3
Query: 135 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSG 314
TLL + EK+ KT+IF+ + + D + + G + +H +Q +RD L DFR G
Sbjct: 993 TLLPDAPIEKQ-KTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRG 1051
Query: 315 KAPILVATDVAARGLDVDDVKFVINFDYPSHS--EDYVHRIGXXGXXNKTGTAYTFFTPS 488
K +VA++V ARGL++ + V+N+D P + ++YV+RIG G TGT+ F
Sbjct: 1052 KYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVE 1111
Query: 489 NAAKASD-LISVLXXA 533
N L+S+L A
Sbjct: 1112 NDTDIIPCLVSILNEA 1127
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 81.4 bits (192), Expect = 8e-16
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = +3
Query: 135 TLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSG 314
TLL + EK+ KT+IF+ + + D + + G + +H +Q +RD L DFR G
Sbjct: 993 TLLPDAPIEKQ-KTLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRG 1051
Query: 315 KAPILVATDVAARGLDVDDVKFVINFDYPSHS--EDYVHRIGXXGXXNKTGTAYTFFTPS 488
K +VA++V ARGL++ + V+N+D P + ++YV+RIG G TGT+ F
Sbjct: 1052 KYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVE 1111
Query: 489 NAAKASD-LISVLXXA 533
N L+S+L A
Sbjct: 1112 NDTDIIPCLVSILNEA 1127
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/124 (31%), Positives = 66/124 (53%)
Frame = +3
Query: 120 ETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQ 299
E K + L + +E + +IF T+RRV +T ++ C HG+ NER+ +++
Sbjct: 212 EWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVK 271
Query: 300 DFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFF 479
DF S +LV TD+ ARG+++ +IN+D + E+Y+ R G G G +FF
Sbjct: 272 DFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFF 330
Query: 480 TPSN 491
T ++
Sbjct: 331 TEND 334
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 78.2 bits (184), Expect = 7e-15
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Frame = +3
Query: 66 AANHNILQIIDVCX-EYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR--D 236
++N ++ Q + C E K+ + LL+ + ++F+++K R + + +
Sbjct: 342 SSNTSVKQKLTYCGTEDGKKIAIRNLLRTSF---KPPALVFVQSKDRAVQLVKLLSAIDS 398
Query: 237 GWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSED 416
I+ S ERD ++ FR G+ +LV T++ RGLD+ DV VIN+D P+
Sbjct: 399 NLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVS 458
Query: 417 YVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLISVL 524
Y+HR+G G K+G A T+FT ++ + +V+
Sbjct: 459 YIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVI 494
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/125 (29%), Positives = 60/125 (48%)
Frame = +3
Query: 126 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDF 305
KL+ +LK I + + ++F + + + I +K G + SQ +R +
Sbjct: 249 KLTHVLKSI---RYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQL 305
Query: 306 RSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTP 485
R+ + ILV++D+ ARG+D D+V V+N D ++ E Y HRIG G A T
Sbjct: 306 RAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLED 365
Query: 486 SNAAK 500
A K
Sbjct: 366 ERALK 370
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/125 (29%), Positives = 60/125 (48%)
Frame = +3
Query: 126 KLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDF 305
KL+ +LK I + + ++F + + + I +K G + SQ +R +
Sbjct: 249 KLTHVLKSI---RYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQL 305
Query: 306 RSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTP 485
R+ + ILV++D+ ARG+D D+V V+N D ++ E Y HRIG G A T
Sbjct: 306 RAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLED 365
Query: 486 SNAAK 500
A K
Sbjct: 366 ERALK 370
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 68.9 bits (161), Expect = 4e-12
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +3
Query: 99 VCXEYEKETKLSTLLKEIMAEKENK-TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQ 275
+C EK L L + + ++ENK T++F T + V+ + + R G ++
Sbjct: 244 MCRPDEKLFALLHLCRRM--DRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDA 301
Query: 276 NERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNK 455
R +Q F + ILV TDVAARG+D+ + VIN +P ++ +VHR+G +
Sbjct: 302 TARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGR 361
Query: 456 TGTAYTFFTPSNAAKASDLISVL 524
+GTA + +DL L
Sbjct: 362 SGTAISLIANDELPYLTDLFMFL 384
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 68.9 bits (161), Expect = 4e-12
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +3
Query: 99 VCXEYEKETKLSTLLKEIMAEKENK-TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQ 275
+C EK L L + + ++ENK T++F T + V+ + + R G ++
Sbjct: 244 MCRPDEKLFALLHLCRRM--DRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDA 301
Query: 276 NERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNK 455
R +Q F + ILV TDVAARG+D+ + VIN +P ++ +VHR+G +
Sbjct: 302 TARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGR 361
Query: 456 TGTAYTFFTPSNAAKASDLISVL 524
+GTA + +DL L
Sbjct: 362 SGTAISLIANDELPYLTDLFMFL 384
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.9 bits (161), Expect = 4e-12
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +3
Query: 99 VCXEYEKETKLSTLLKEIMAEKENKT--IIFIETKRRVDDITRKMKRDGWPAVCIHGDXS 272
VC K+ L ++K +EK K+ +IF +T R + + G+ +H
Sbjct: 314 VCPVAVKDAYLVYVVKNY-SEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIP 372
Query: 273 QNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXN 452
Q +R L FRS +++ TDVA+RGLD+ V V+N + P + Y+HR+G
Sbjct: 373 QKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAG 432
Query: 453 KTGTAYTFFT 482
+ G+A +F T
Sbjct: 433 RFGSALSFVT 442
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.9 bits (161), Expect = 4e-12
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +3
Query: 99 VCXEYEKETKLSTLLKEIMAEKENKT--IIFIETKRRVDDITRKMKRDGWPAVCIHGDXS 272
VC K+ L ++K +EK K+ +IF +T R + + G+ +H
Sbjct: 314 VCPVAVKDAYLVYVVKNY-SEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIP 372
Query: 273 QNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXN 452
Q +R L FRS +++ TDVA+RGLD+ V V+N + P + Y+HR+G
Sbjct: 373 QKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAG 432
Query: 453 KTGTAYTFFT 482
+ G+A +F T
Sbjct: 433 RFGSALSFVT 442
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +3
Query: 108 EYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR--DGWPAVCIHGDXSQNE 281
E + K S L+ I + K +IF + V + +R P +HG S
Sbjct: 238 ECRADEKTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPH 297
Query: 282 RDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTG 461
R ++ F ++++TDV ARG+D+ D+ +VI FD P HS +VHR G + G
Sbjct: 298 RASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGREG 357
Query: 462 TA 467
A
Sbjct: 358 NA 359
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 64.9 bits (151), Expect = 7e-11
Identities = 33/106 (31%), Positives = 53/106 (50%)
Frame = +3
Query: 174 TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAAR 353
TII+ +TK+ VDD+ ++R G + H ++N+R+ DF K +VAT
Sbjct: 449 TIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRDKITTIVATVAFGM 508
Query: 354 GLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTPSN 491
G+D DV+ VI++ P++ E Y IG G F+ P +
Sbjct: 509 GIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKD 554
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +3
Query: 117 KETKLSTLLKEIMAEK-ENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWV 293
+ET ++ ++ + TI+F+ TK+ + + G + +Q +R
Sbjct: 400 RETDREAMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIES 459
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTG 461
L F+ + +LV+TD+A+RGLD++ V+ VIN + P + Y+HR+G K G
Sbjct: 460 LSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAG 515
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 61.7 bits (143), Expect = 7e-10
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +3
Query: 114 EKETKLSTLLKEIMAEKENKTIIF---IETKRRVDDITRKMKRDGWPAVCIHGDXSQNER 284
EK+T L LL +TI+F I+ RR+ + + + D P + +H Q +R
Sbjct: 260 EKDTSLVYLLTRY----PGRTIVFVNSIDAARRLYSVLKSVNID--PMI-LHAKMIQKQR 312
Query: 285 DWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGT 464
L+ F K +L+ATDVAARGLD+ + VI++ P E Y+HR G + G
Sbjct: 313 LKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGL 372
Query: 465 AYTFFTP 485
P
Sbjct: 373 TVVLVDP 379
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 61.7 bits (143), Expect = 7e-10
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = +3
Query: 114 EKETKLSTLLKEIMAEKENKTIIF---IETKRRVDDITRKMKRDGWPAVCIHGDXSQNER 284
EK+T L LL +TI+F I+ RR+ + + + D P + +H Q +R
Sbjct: 427 EKDTSLVYLLTRY----PGRTIVFVNSIDAARRLYSVLKSVNID--PMI-LHAKMIQKQR 479
Query: 285 DWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGT 464
L+ F K +L+ATDVAARGLD+ + VI++ P E Y+HR G + G
Sbjct: 480 LKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGL 539
Query: 465 AYTFFTP 485
P
Sbjct: 540 TVVLVDP 546
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 120 ETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQ 299
+ +L L + K K ++F + V + P + IHG Q +R
Sbjct: 299 DKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFF 358
Query: 300 DFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXG-XXNKTGTAYTF 476
F + IL+ TDVAARGLD+ V +++ +D +Y+HR+G N +G A
Sbjct: 359 QFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLV 418
Query: 477 FTP 485
P
Sbjct: 419 LRP 421
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 58.0 bits (134), Expect = 8e-09
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Frame = +3
Query: 174 TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAAR 353
++IF TK V + M+ G +HGD + ER + F+ G +L+ T+V AR
Sbjct: 458 SVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFAR 517
Query: 354 GLDVDDVKFVINFDYP-----------------SHSEDYVHRIGXXGXXNKTGTA 467
G+DV V VIN+D P E Y+HRIG G KTG A
Sbjct: 518 GIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 572
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 58.0 bits (134), Expect = 8e-09
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Frame = +3
Query: 174 TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAAR 353
++IF TK V + M+ G +HGD + ER + F+ G +L+ T+V AR
Sbjct: 483 SVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFAR 542
Query: 354 GLDVDDVKFVINFDYP-----------------SHSEDYVHRIGXXGXXNKTGTA 467
G+DV V VIN+D P E Y+HRIG G KTG A
Sbjct: 543 GIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 597
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 58.0 bits (134), Expect = 8e-09
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Frame = +3
Query: 174 TIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAAR 353
++IF TK V + M+ G +HGD + ER + F+ G +L+ T+V AR
Sbjct: 867 SVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFAR 926
Query: 354 GLDVDDVKFVINFDYP-----------------SHSEDYVHRIGXXGXXNKTGTA 467
G+DV V VIN+D P E Y+HRIG G KTG A
Sbjct: 927 GIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGIA 981
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 54.8 bits (126), Expect = 8e-08
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +3
Query: 144 KEIMAEKENKTIIFIE---TKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSG 314
++I K N+T+IF+ + R+ + +++ +D + R +L+ F
Sbjct: 389 QQITRNKFNRTLIFVNEVSSSNRLAHVLKELCKDQFEVDYFTAQLFGKRRYKMLEKFNKN 448
Query: 315 KAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTG 461
+ +L+ +DV ARG D++ V VIN++ P+ + +VHR G G + G
Sbjct: 449 ENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDG 497
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Frame = +3
Query: 141 LKEIMAEKE---NKTI-IFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFR 308
LKE K+ N+TI IF ET +RV +T +++ G+ + ++N++ + D
Sbjct: 364 LKETGCSKDGPYNETIAIFCETVQRVTQVTMALRQLGYNFKPVCSMITKNQQLVTVNDLE 423
Query: 309 SGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXG 443
K +V T++ ARG+DV VK I + + + Y HRIG G
Sbjct: 424 FRKIHGVVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVG 468
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 51.6 bits (118), Expect = 7e-07
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Frame = +3
Query: 72 NHNILQIIDVCXEYEKETKLSTLLKEIMAEK-ENK------TIIFIETKRRVDDITRKMK 230
NH + I C + +T S L K AE+ +NK I++ ++ + + ++
Sbjct: 377 NH-MASFITKCLTVDAKTSSSNLTKHEKAERSQNKKTFTGSAIVYCRSRNECGQVAKMLE 435
Query: 231 RDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHS 410
G PA+ H + +R+ V + + + + P++ AT G+D DV+ VI++ +
Sbjct: 436 IAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNL 495
Query: 411 EDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLIS 518
Y G G K +++ + + L+S
Sbjct: 496 AGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVS 531
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/113 (24%), Positives = 51/113 (45%)
Frame = +3
Query: 177 IIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARG 356
II+ ++ + + + +K G A H +R Q + SGK ++VAT G
Sbjct: 313 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 372
Query: 357 LDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLI 515
+D +V+FVI+ P E+Y G G + T ++ ++ K S ++
Sbjct: 373 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQSSMV 425
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/113 (24%), Positives = 51/113 (45%)
Frame = +3
Query: 177 IIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARG 356
II+ ++ + + + +K G A H +R Q + SGK ++VAT G
Sbjct: 336 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 395
Query: 357 LDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYTFFTPSNAAKASDLI 515
+D +V+FVI+ P E+Y G G + T ++ ++ K S ++
Sbjct: 396 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQSSMV 448
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 168 NKTI-IFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDV 344
N+TI IF ET +RV +T +++ G+ + ++N++ + D K +V T++
Sbjct: 223 NETIAIFCETVQRVTQVTMTLRQLGYNFKPVCSMITKNQQLVTVNDLEFRKIHGVVCTNI 282
Query: 345 AARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
ARG+DV VK I + + + Y HRIG
Sbjct: 283 LARGIDVSSVKHTIIMEMSADFDTYKHRIG 312
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 QDFRSGK-APILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYT 473
+D + GK A L +RG+D V V+NFD+P ++ Y+HR+G GTA +
Sbjct: 351 KDEKKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALS 410
Query: 474 FFTPSNAA 497
F PS A
Sbjct: 411 FCIPSERA 418
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 QDFRSGK-APILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTAYT 473
+D + GK A L +RG+D V V+NFD+P ++ Y+HR+G GTA +
Sbjct: 418 KDEKKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALS 477
Query: 474 FFTPSNAA 497
F PS A
Sbjct: 478 FCIPSERA 485
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +3
Query: 141 LKEIMAEKENK---TI-IFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFR 308
LKE+ + KE TI IF ET RV +T +++ G+ + + ++ L D
Sbjct: 362 LKEMGSTKEGPWKHTIAIFCETVSRVIQVTMALRQMGYNFKPVCSSVLKQQQAITLNDLE 421
Query: 309 SGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIGXXGXXNKTGTA 467
+V T++ +RG+DV VK I + + Y+HRIG G G A
Sbjct: 422 FCNIHGVVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGGRA 474
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 177 IIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARG 356
I++ +++ + + + + G A H + N R V + + + K ++ AT G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 357 LDVDDVKFVINFDYPSHSEDYVHRIGXXG 443
+D DV+FVI++ P E Y G G
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGYYQETGRAG 561
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 177 IIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQNERDWVLQDFRSGKAPILVATDVAARG 356
I++ +++ + + + + G A H + N R V + + + K ++ AT G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 357 LDVDDVKFVINFDYPSHSEDYVHRIGXXG 443
+D DV+FVI++ P E Y G G
Sbjct: 533 IDKPDVRFVIHYSLPKSIEGYYQETGRAG 561
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
L+ F G+ ILV+T VA GLD+ + VI ++Y ++ +V R G
Sbjct: 341 LKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRG 387
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
L+ F G+ ILV+T VA GLDV + VI ++Y ++ +V R G
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRG 805
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
L+ F G+ ILV+T VA GLDV + VI ++Y ++ +V R G
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRG 805
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +3
Query: 129 LSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKR-----DGWPAVCIHGDXSQNERDWV 293
L + K+ + + +IF+ + + +K +GW + +H S E+D V
Sbjct: 298 LELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKNYAELTNGWIILMLHSTLSVEEQDKV 357
Query: 294 LQDFRSGKAPILVATDVAARGLDVDDVKFVIN 389
G +++T+VA + +D ++FVI+
Sbjct: 358 FDQAPVGIRKCILSTNVAETSVTIDGIRFVID 389
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 34.7 bits (76), Expect = 0.087
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 270 SQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSE-DYVHRIGXXGX 446
+ E+ L F +G+ ++VAT V GLDV +I ++ S S V + G
Sbjct: 812 TSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIKYNCSSGSAIQLVQQRGRARA 871
Query: 447 XNKTGTAYTFFTPSNAAKASDLIS 518
N + + N + + LIS
Sbjct: 872 KNSRSVLLSVKSSINETETNALIS 895
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 34.7 bits (76), Expect = 0.087
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +3
Query: 291 VLQDFRSGKAPILVATDVAARGLDVDDVKFVINFDYPSHSEDYVHRIG 434
VL+ F + L+AT V G+DV VI FD P YV G
Sbjct: 445 VLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKG 492
>AF040653-5|AAB95026.1| 491|Caenorhabditis elegans F-box b protein
protein 52 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +3
Query: 99 VCXEYEKETKLSTLLKEIMAEKENKTIIFIETKRRVDDITRKMKRDGWPAVCIHGDXSQN 278
VC E T+LS+ K EK++ IFI+ + D+ RDG V I D +
Sbjct: 323 VCFEL---TQLSSNFKNFQLEKDDAGCIFIDRSHKHFDLILNFMRDG--HVAIANDHKEK 377
Query: 279 ERDWVLQDFRSGKAPILV 332
+ D+ LQ + PILV
Sbjct: 378 DADF-LQILADQQKPILV 394
>Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Frame = +3
Query: 36 LKDFFGSLQLAANHNILQIIDVCX----EYEKETKLSTLLKEIMAEKENKTIIFIETKRR 203
L +FF + ++ ++D C E EKE K++ +++AE +NKT+I + ++
Sbjct: 76 LDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKITIKTTQLLAEVDNKTLINVVFEKG 135
Query: 204 VDD-------ITRKMKRDGWPAVCIHGDXSQNERD 287
+ + I R+ +DG + I + S +E D
Sbjct: 136 IFEFPIWIPHILRRFCKDGINKINIQFEGSPSEND 170
>Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Frame = +3
Query: 36 LKDFFGSLQLAANHNILQIIDVCX----EYEKETKLSTLLKEIMAEKENKTIIFIETKRR 203
L +FF + ++ ++D C E EKE K++ +++AE +NKT+I + ++
Sbjct: 76 LDNFFNCFLNKSPELMMSLLDHCAWAPSEIEKEAKITIKTTQLLAEVDNKTLINVVFEKG 135
Query: 204 VDD-------ITRKMKRDGWPAVCIHGDXSQNERD 287
+ + I R+ +DG + I + S +E D
Sbjct: 136 IFEFPIWIPHILRRFCKDGINKINIQFEGSPSEND 170
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 32.7 bits (71), Expect = 0.35
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 93 IDVCXEYEKETKLSTLLKEIMAEKENKTIIFIE--TKRRVDDITRKMKRDGWPAVCIHGD 266
+++ + + K + L EI+ E+ N ++FI+ +R M W H
Sbjct: 150 LNIASRFHEINKTDSSLLEILKERANG-LLFIKHGLERNGCKDRNVMSTLAWGVAYHHAG 208
Query: 267 XSQNERDWVLQDFRSGKAPILVATDVAARGLDVDDVKFVI 386
+ ER+ + FR ILVAT A G+++ + +I
Sbjct: 209 LTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLI 248
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 51 GSLQLAANHNILQIIDVCXEYEKETKLSTLLKEIMAEKE 167
GS+QL A+H Q +VC EY+ + LLKE + E
Sbjct: 257 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLE 295
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 51 GSLQLAANHNILQIIDVCXEYEKETKLSTLLKEIMAEKE 167
GS+QL A+H Q +VC EY+ + LLKE + E
Sbjct: 272 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLE 310
>AC006663-5|AAY43999.1| 490|Caenorhabditis elegans Hypothetical
protein H24K24.2 protein.
Length = 490
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 238 DGXQCVFMVTNHKMKEIGCFKIFVVEK 318
+G QC+ + NHKM +IG +F K
Sbjct: 324 NGLQCLIWIINHKMDQIGPVNMFFTLK 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,223,613
Number of Sequences: 27780
Number of extensions: 181345
Number of successful extensions: 596
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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