Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H13
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0142 - 940421-940701,941262-941574 31 0.90
06_03_1310 + 29238644-29240260 31 1.6
06_03_0696 + 23617687-23617851,23618838-23619536 31 1.6
01_01_0070 - 542603-542686,542803-543441 30 2.1
04_04_1542 - 34264994-34265331,34266195-34267029 30 2.8
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 30 2.8
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 2.8
11_01_0359 - 2731522-2732346 29 3.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 4.8
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 6.4
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 29 6.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.4
12_02_1174 - 26696869-26698191 28 8.4
12_01_0495 - 3935395-3937110 28 8.4
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 8.4
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 28 8.4
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 28 8.4
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = +1
Query: 544 PXGHXXAPTR*KGPLAGVFPYAPPPLTHPPQTSXPQAHHXGQXPPGL*RSPXXFPP 711
P G P P G +P PPP +PPQ PQ G PPG +PP
Sbjct: 43 PPGAYPPPPGAYPPPPGAYP--PPPGAYPPQHGYPQP--GGYPPPGGYPQHGGYPP 94
>06_03_1310 + 29238644-29240260
Length = 538
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 604 YAPPPLTHPPQTSXPQAHHXGQXPPGL*RSP 696
Y PPLT PP T+ P HH PG SP
Sbjct: 452 YVLPPLTPPPPTTTPPGHH--APVPGTPSSP 480
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 610 PPPLTHPPQTSXPQAHHXGQXPP 678
PPP PP S P H GQ PP
Sbjct: 78 PPPPPPPPPPSPPATHDVGQPPP 100
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 601 PYAPPPLTHPPQTSXPQAHHXGQXPPGL*RSPXXFPP 711
P PPP+T PP T P + PP L P PP
Sbjct: 94 PVTPPPVTPPPVTPPPVSPPPATPPPAL---PPSTPP 127
>04_04_1542 - 34264994-34265331,34266195-34267029
Length = 390
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 550 GHXXAPTR*KGPLAGVFPYAPPPLTHPPQTSXPQAHHXG 666
G APT PLA P PPP P + Q HH G
Sbjct: 210 GATIAPTPPPPPLALPLPPPPPPSPPKPLVAQQQHHHHG 248
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 592 GVFPYAPPPLTHPPQTSXPQAHHXG--QXPPGL*RSPXXFPP 711
G +P APP +PP P + G PPG P +PP
Sbjct: 187 GGYPPAPPAQGYPPAAYPPAGYPQGGAYPPPGSYPPPGSYPP 228
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 544 PXGHXXAPTR*KGPLAGVFPYAPPPLTHPPQTSXPQAHHXGQXPP 678
P + P + GP +G APPP++ PP + PQA PP
Sbjct: 184 PAMYQTNPPQPAGPTSG----APPPVSAPPPAAPPQAPFSYAQPP 224
>11_01_0359 - 2731522-2732346
Length = 274
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 APTR*KGPLAGVFPY-APPPLTHP-PQTSXPQAHHXGQXPPGL*RSPXXFPP 711
A T A +PY APPP +H P P A+H PP +PP
Sbjct: 27 AATNGTAAFAVAYPYPAPPPHSHSHPPPPPPHAYHHHHYPPPPPPHHHPYPP 78
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 562 APTR*KGPLAGVFPYAPPPLTHPPQTSXPQAHHXGQXPPGL 684
AP + P GV YAPPP PP + P PPG+
Sbjct: 461 APGQATPPPYGV-QYAPPPAPIPPPGTAPSTDGAQNYPPGV 500
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 583 PLAGVFPYAPPP-LTHPPQTSXPQAHHXGQXPPGL*RSPXXFPP 711
P +G +PY PP +PPQ P +H P G P PP
Sbjct: 45 PQSGPYPYPPPSGAVYPPQ-GYPSSHGVYPPPQGPYPPPHQPPP 87
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 601 PYAPPPLTHPPQTSXPQAH---HXGQXPPGL*RSPXXFPP 711
PY PPP ++PP P + G PP +P + P
Sbjct: 391 PYGPPPQSYPPNVRLPSPYVPPPSGPAPPFYGPNPGMYEP 430
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Frame = +1
Query: 592 GVFPYAPPPLTHPPQTSXPQA-----HHXGQXPPGL*RSPXXFPP 711
G P APPP PP + P HH G PP P PP
Sbjct: 270 GQVPAAPPPPAGPPPPAPPPLPPSHHHHHGHHPP----PPHPLPP 310
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Frame = +1
Query: 601 PYAPPPLTHPPQTSXPQAHHXGQXPPGL-*RSPXXFPPWXXXXXXXXXXXXXXXXYPDXW 777
P PPP PP P Q PP L SP PP P
Sbjct: 158 PPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLP 217
Query: 778 SPLSPPGXXVAPSXT 822
P PP P T
Sbjct: 218 PPSPPPPPPTVPPRT 232
>12_01_0495 - 3935395-3937110
Length = 571
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 601 PYAPPPLTHPPQTSXPQAHHXGQXPPGL*RSP 696
P PPP PP + PQ + + PPG+ +P
Sbjct: 7 PPLPPPPPPPPPPATPQQNKAVELPPGVYFNP 38
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Frame = +1
Query: 577 KGPLAGVFPYAPPPLT---HPPQTSXPQAHHXGQXPP----GL*RSPXXFPP 711
KGP P PPP + HP P HH PP R P PP
Sbjct: 214 KGPKGAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPP 265
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 595 VFPYAPPPLTHPPQTSXPQAHH 660
+ P+ PPP PP PQ HH
Sbjct: 49 LLPHQPPPPPPPPPLPQPQHHH 70
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 610 PPPLTHPPQTSXPQAHHXGQXPP 678
PPP HPP+ P H PP
Sbjct: 121 PPPPPHPPEDPPPHPPHPPDHPP 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,470,499
Number of Sequences: 37544
Number of extensions: 130332
Number of successful extensions: 703
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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