Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H11
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   215   3e-56
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   215   3e-56
AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical ...   126   3e-29
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   118   6e-27
U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...    45   6e-05
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    37   0.022
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    35   0.090
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    31   1.5  
U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical ...    30   2.6  
AL032635-6|CAE18002.1|  193|Caenorhabditis elegans Hypothetical ...    29   3.4  
AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  215 bits (526), Expect = 3e-56
 Identities = 104/133 (78%), Positives = 116/133 (87%)
 Frame = +3

Query: 252 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 431
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 7   SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 66

Query: 432 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPIDGKGPXDTKS 611
           L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDAL NPIDGKGP     
Sbjct: 67  LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 126

Query: 612 RMRVRIKAPGIIP 650
           R RV +KAPGIIP
Sbjct: 127 RSRVEVKAPGIIP 139



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 26/42 (61%), Positives = 28/42 (66%)
 Frame = +1

Query: 649 PRXSVREPMQTGIKAVXSLGTNWSWXTRELIIXDRQTGXXAL 774
           PR SVREPM TG+KAV SL        RELII DRQTG  A+
Sbjct: 139 PRLSVREPMVTGVKAVDSL-VPIGRGQRELIIGDRQTGKTAI 179


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  215 bits (526), Expect = 3e-56
 Identities = 104/133 (78%), Positives = 116/133 (87%)
 Frame = +3

Query: 252 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 431
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 432 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPIDGKGPXDTKS 611
           L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDAL NPIDGKGP     
Sbjct: 94  LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 153

Query: 612 RMRVRIKAPGIIP 650
           R RV +KAPGIIP
Sbjct: 154 RSRVEVKAPGIIP 166



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 26/42 (61%), Positives = 28/42 (66%)
 Frame = +1

Query: 649 PRXSVREPMQTGIKAVXSLGTNWSWXTRELIIXDRQTGXXAL 774
           PR SVREPM TG+KAV SL        RELII DRQTG  A+
Sbjct: 166 PRLSVREPMVTGVKAVDSL-VPIGRGQRELIIGDRQTGKTAI 206


>AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical
           protein H28O16.1b protein.
          Length = 146

 Score =  126 bits (303), Expect = 3e-29
 Identities = 60/76 (78%), Positives = 68/76 (89%)
 Frame = +3

Query: 252 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 431
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 432 LEPDNVGVVVFGNDKL 479
           L+ DNVGVVVFGNDK+
Sbjct: 94  LDVDNVGVVVFGNDKI 109


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  118 bits (284), Expect = 6e-27
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = +3

Query: 252 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 431
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 432 LEPDNVGVVVFGN 470
           L+ DNVGVVV GN
Sbjct: 94  LDVDNVGVVVLGN 106



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 26/42 (61%), Positives = 28/42 (66%)
 Frame = +1

Query: 649 PRXSVREPMQTGIKAVXSLGTNWSWXTRELIIXDRQTGXXAL 774
           PR SVREPM TG+KAV SL        RELII DRQTG  A+
Sbjct: 131 PRLSVREPMVTGVKAVDSL-VPIGRGQRELIIGDRQTGKTAI 171



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
 Frame = +3

Query: 267 ILEERILGAAPKADLEETGRVLSIGDGIARVYG--LKNIQAEEMVEFSSGLK----GMAL 428
           +L +RI+ A   A   +   + +   G+A   G  +  I  E ++   +G+     G  L
Sbjct: 1   MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 60

Query: 429 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPIDGKGPXDTK 608
           ++  D +  V +G  K I+  ++V+    I  + +   +    V  L NPIDGKGP    
Sbjct: 61  SIG-DGIARV-YGL-KNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVLGNPIDGKGPIANA 117

Query: 609 SRMRVRIKAPGIIP 650
            R RV +KAPGIIP
Sbjct: 118 RRSRVEVKAPGIIP 131


>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 20/65 (30%), Positives = 38/65 (58%)
 Frame = +3

Query: 453 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPIDGKGPXDTKSRMRVRIK 632
           + + G + L++ G  V  TG  + +PVG + LGR+++ +  PID +GP  +K+   +  +
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAE 178

Query: 633 APGII 647
           AP  +
Sbjct: 179 APEFV 183


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 417 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPIDGKG 593
           G  L +  +   V VF G   +  +  I + TG I+  PV E +LGR+ +    PID KG
Sbjct: 66  GQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPID-KG 124

Query: 594 P 596
           P
Sbjct: 125 P 125


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +3

Query: 411 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALXNPI 581
           L G  + LE D   + V+     +  GD V RTG  + V +G  I+G + D +  P+
Sbjct: 39  LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPL 95


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 357 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 533
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 534 GEQILGR-VVDAL 569
              ++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 357 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 533
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 534 GEQILGR-VVDAL 569
              ++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703


>U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical
           protein C16D9.3 protein.
          Length = 151

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 396 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 307
           PP  Q  C      ER H  C R+DQS+++
Sbjct: 96  PPGSQLKCHFDKSRERLHANCYRYDQSVVN 125


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 396 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 307
           PP  Q  C   H   +Y+  C R+DQS+++
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIIN 314


>AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical
           protein T24C4.2 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 430 LRAIPLRPEENSTISSAWMFFKP*TRAIPSPMLKTRPVSSRSALGAAPRILS 275
           +R IPLRP +NS       F++    +  SP++        S LGAA R+L+
Sbjct: 352 VRPIPLRPSQNSA------FYQMLNSSSTSPIIAVTKAEVDSVLGAASRLLN 397


>AL032635-6|CAE18002.1|  193|Caenorhabditis elegans Hypothetical
           protein Y51A2A.11 protein.
          Length = 193

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -1

Query: 685 YQSA*AHAQTXGGMIPGALIRTLIRDXVSXGPLPSI--GLXKASTTRPRICSPTGT 524
           YQ   A+    GG+I   LIR LI   VS     +   GL KA       C+P  T
Sbjct: 64  YQGGVANGAVEGGVINDDLIRALINKKVSGAHAVTWIGGLRKARCVNVAACAPANT 119


>AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical
           protein F41B4.1 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 405 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQ 304
           R  PP P P  + SHK+E      SR   S L++
Sbjct: 54  RELPPPPPPRKTPSHKYEEMRRSLSRGPSSTLER 87


>Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical
           protein C15C8.3 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -3

Query: 440 RFQVKGHSLET*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKD-PLFEDG 264
           R   KG   E   E + LLS   LQ  ++S  + + +D   +  ISLG  +++  LF D 
Sbjct: 32  RMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQNFVLFIDS 91

Query: 263 GDLGSFV 243
           G    +V
Sbjct: 92  GSSNLWV 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,144,786
Number of Sequences: 27780
Number of extensions: 373879
Number of successful extensions: 1143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)