Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H10
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63... 122 4e-28
08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161... 121 7e-28
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378... 120 1e-27
02_03_0120 + 15463163-15465250 31 1.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.2
03_01_0515 - 3864796-3865425 30 2.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 3.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.8
02_05_0460 - 29224525-29224620,29225525-29226625 29 5.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 6.6
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 6.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.6
06_01_0690 + 5033943-5034740 29 6.6
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.6
06_03_1326 - 29355467-29355817 28 8.8
>02_01_0089 +
633642-633644,633728-633863,635356-635457,635565-635608
Length = 94
Score = 122 bits (294), Expect = 4e-28
Identities = 52/93 (55%), Positives = 67/93 (72%)
Frame = +1
Query: 100 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 279
M KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60
Query: 280 XXXMRHLKIVRRRFRNGFKEGKPTPPKKAVASS 378
MR+++ V RRF++ F+EG P+K A++
Sbjct: 61 TGRMRYMRHVPRRFKSNFREGTEATPRKRAAAA 93
>08_01_0195 +
1612938-1613003,1613026-1613161,1614624-1614725,
1614833-1614876
Length = 115
Score = 121 bits (292), Expect = 7e-28
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +1
Query: 91 SDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXX 270
S + KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA
Sbjct: 19 SSNVGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRK 78
Query: 271 XXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 372
MR+++ V RRF++ F+EG P+K A
Sbjct: 79 TTGTGRMRYMRHVPRRFKSNFREGTEATPRKRAA 112
>02_05_1204 +
34936696-34936698,34936809-34936944,34937794-34937895,
34938153-34938199
Length = 95
Score = 120 bits (290), Expect = 1e-27
Identities = 52/93 (55%), Positives = 67/93 (72%)
Frame = +1
Query: 100 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 279
M KGT SFGKRRNKTHTLC RCGR S+H+QKS C+ CGYPAA++R Y+WSVKA
Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60
Query: 280 XXXMRHLKIVRRRFRNGFKEGKPTPPKKAVASS 378
MR+L+ V +RF++ F+EG P+K A++
Sbjct: 61 TGRMRYLRHVPKRFKSNFREGTEAAPRKKGAAA 93
>02_03_0120 + 15463163-15465250
Length = 695
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 765 PPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPPXXGN 893
PPP +GP P ++ PP P P P P PP N
Sbjct: 284 PPPTKY----IGPMPPNNQPLPPPPSPSPSPPPPSPPPPPHPN 322
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P S PP P P P P +PP
Sbjct: 618 PPPPPPPP-----PLPNHSVLPPPPPPPPPPSLPNRLVPP 652
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 738 ARFSCLKXPPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
+ ++ + PPPP P P PP P P P P +PP
Sbjct: 578 SNYASSQPPPPPPPP------PLPNCLVPSPPPPPPPPPILPNRSVPP 619
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 747 SCLKXPPPPXXXXXXXLGPXPXS-SXXXPPXPXPXPXXXPXXXLPP 881
S PPPP P P S + PP P P P P PP
Sbjct: 56 SVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPP 101
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P PP P P P +PP
Sbjct: 1171 PPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPP 1210
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 457 PPPPXXXXXPXXXPXXPGPGXPP 525
PPPP P PGPG PP
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPP 372
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +3
Query: 657 PLLTRPPHXNXXPXXXFFFPGSXGAXWARFSC--LKXPPPPXXXXXXXLGPXPXSSXXXP 830
PLL PPH P P S A A S L+ PP P +S P
Sbjct: 254 PLLLAPPHMQKRPPVLPVSPASAPAALAESSSEELRPPPLPSSHPHAHAAAVVAASASAP 313
Query: 831 PXP 839
P P
Sbjct: 314 PGP 316
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXP 863
PPPP P P PP P P P P
Sbjct: 614 PPPPPRPPGAPPPPPPPGKPGGPPPPPPRPGSLP 647
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Frame = +3
Query: 693 PXXXFFFPGSXGAXWARFSCLKXPPPPXXXXXXXLGPXPXSS-----XXXPPXPXPXPXX 857
P PG A W L PPPP L P P S+ PP P P P
Sbjct: 7 PGAELLSPGE--AEWPPELRLPPPPPPHPPPPPPLEPAPPSTPQLRGEASPPPPPPPPVG 64
Query: 858 XP 863
P
Sbjct: 65 PP 66
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P P P P P P PP
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPP 122
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P PP P P P PP
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPP 133
>06_01_0690 + 5033943-5034740
Length = 265
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 880 GGRXXXGXXXGXGXGXGGXXXEEXGXGPKXXXXLXXGGGG 761
GG G G G G G + G GP GGGG
Sbjct: 156 GGGGGGGQNGGSGYGSGSGYGQAGGYGPYGGGYAQGGGGG 195
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P + PP P P P PP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPP 355
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 762 PPPPXXXXXXXLGPXPXSSXXXPPXPXPXPXXXPXXXLPP 881
PPPP P P PP P P P PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPP 365
>06_03_1326 - 29355467-29355817
Length = 116
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 880 GGRXXXGXXXGXGXGXGGXXXEEXGXGPKXXXXLXXGGGG 761
GG+ G G G G GG + G G GGGG
Sbjct: 2 GGKGGGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGG 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,986,014
Number of Sequences: 37544
Number of extensions: 457737
Number of successful extensions: 1955
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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