Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H08
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19...    31   1.1  
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426...    31   1.5  
02_05_1313 - 35658599-35658683,35659231-35659313,35659394-356594...    31   1.5  
04_03_0806 + 19857675-19859135                                         30   2.0  
05_06_0232 + 26596478-26596480,26596492-26596574,26596813-265969...    29   3.5  
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36...    29   4.6  
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558...    29   6.1  

>01_01_0025 +
           188915-189132,190625-190705,191350-191506,191958-192161,
           192248-192356,192401-192496,192724-193994,194200-194384,
           194619-195055,197034-197077,197830-199036,199253-199479
          Length = 1411

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 803 QTISDGRRDISKVPRXVLRLYNPRLSPDSEYVPNVDSPVCMVHMLLQYYN 654
           QT    +R++++  R  LRL   RLS D  Y+     P C  H+L ++++
Sbjct: 62  QTARRRKREVARSTRHCLRLAVFRLSVDFSYITLEALPSCFHHILRKHFS 111


>03_06_0704 +
           35641774-35642031,35642122-35642446,35642546-35642699,
           35643662-35643706,35644121-35644180,35644532-35644694,
           35645356-35645717,35645985-35646303
          Length = 561

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = -2

Query: 746 LYNPRLSPDSEYVPNVDSPVCMVHMLLQYYNTQNPCVARPAG*VHRSHVRSALVRSGILI 567
           L N   SPD  Y+ +  S   M+H+    +N QNPC +  A   H+  V  AL      +
Sbjct: 490 LINQSWSPDGWYLSS-GSADPMIHIFDIRHNGQNPCQSVQA---HQKRVFKALWHRTAPV 545

Query: 566 PSGLMSPLNVQEH 528
            + + S LN+  H
Sbjct: 546 LTSISSDLNIGIH 558


>02_05_1313 -
           35658599-35658683,35659231-35659313,35659394-35659489,
           35659615-35659693,35659775-35659852,35659989-35660030,
           35660435-35660532,35660628-35660747,35660840-35660926
          Length = 255

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = -2

Query: 485 VDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKVCCPSSYRSSALTAL 333
           + CVR+ ++    Q+  P   ++  + ++ +NGFS++  P+S +S+    L
Sbjct: 155 IQCVRMHLENTKSQIGSPAKTYSA-MGSSSSNGFSEMTTPTSVKSNPAPVL 204


>04_03_0806 + 19857675-19859135
          Length = 486

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +1

Query: 295 LRVDSPTKVRTVPNAVSAEER*ELGQHTLEKPLACAATMVTLNLLP 432
           LR+  P    T+P AVSA      G+H L   L+  A  VT NLLP
Sbjct: 87  LRLSVPPTRHTLPLAVSAAAAASAGRH-LPLALSLHAVAVTRNLLP 131


>05_06_0232 +
           26596478-26596480,26596492-26596574,26596813-26596934,
           26597447-26597611,26597816-26597909,26598001-26598208
          Length = 224

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 126 SWQDHADDLLHVIKHFSTQMQQPIVG-VGHSMGG 28
           +++  ADDL  V+ +F T+ +  I+G VGHS GG
Sbjct: 39  NYRREADDLHSVVSYF-TEQEYNIIGLVGHSKGG 71


>09_01_0014 +
           357398-357583,360213-360323,360520-360676,361067-361233,
           362012-362122,362206-362349,362436-362476,364134-364174,
           364175-364261,365402-365724
          Length = 455

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 126 SWQDHAD-DLLHVIKHFSTQMQQPIVGVGHSMG 31
           SWQ+ A+ DLL ++ +  T  Q  I+ VGHS G
Sbjct: 213 SWQELAEYDLLAMLGYVYTVTQSKILYVGHSQG 245


>02_05_0308 -
           27754340-27754634,27755591-27755696,27755781-27755855,
           27756039-27757410
          Length = 615

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +2

Query: 473 AHSPR*PLPLSANEDTEPHAPAR*EGTSSQMVSVCPSVPMPIARGICELI 622
           A  PR    +  N  +    PA     S+ +++V PS+P P+A  + +L+
Sbjct: 17  APCPRQIAAVVLNHPSSALTPASTRSLSASLLAVAPSLPTPVADSVLKLL 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,256,733
Number of Sequences: 37544
Number of extensions: 563660
Number of successful extensions: 1435
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)