Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H08
         (843 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p pro...    30   4.6  
AY061587-1|AAL29135.1|  842|Drosophila melanogaster SD03976p pro...    30   4.6  
AF001796-1|AAB63271.1|  959|Drosophila melanogaster putative Kru...    30   4.6  
AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB...    30   4.6  
AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA...    30   4.6  
AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC...    30   4.6  

>AY119444-1|AAM50098.1| 1133|Drosophila melanogaster AT03104p
           protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 623 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 682

Query: 374 CCPSS 360
             P +
Sbjct: 683 FVPQN 687


>AY061587-1|AAL29135.1|  842|Drosophila melanogaster SD03976p
           protein.
          Length = 842

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 332 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 391

Query: 374 CCPSS 360
             P +
Sbjct: 392 FVPQN 396


>AF001796-1|AAB63271.1|  959|Drosophila melanogaster putative
           Krueppel target geneprotein protein.
          Length = 959

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 434 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 493

Query: 374 CCPSS 360
             P +
Sbjct: 494 FVPQN 498


>AE014297-3436|AAN13968.1| 1175|Drosophila melanogaster CG5405-PB,
           isoform B protein.
          Length = 1175

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 665 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 724

Query: 374 CCPSS 360
             P +
Sbjct: 725 FVPQN 729


>AE014297-3435|AAF56220.3| 1175|Drosophila melanogaster CG5405-PA,
           isoform A protein.
          Length = 1175

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 665 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 724

Query: 374 CCPSS 360
             P +
Sbjct: 725 FVPQN 729


>AE014297-3434|AAN13970.2| 1133|Drosophila melanogaster CG5405-PC,
           isoform C protein.
          Length = 1133

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -2

Query: 554 MSPLNVQEHVVLCPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKV 375
           +SP NV+   +L  +L R        +   V   SP  AL GS     +V   AN F   
Sbjct: 623 LSPTNVEPRKLLLDQLSRVFAGEDSAIPEVVTIISPPEALGGSALLAKLVTLFANSFKPA 682

Query: 374 CCPSS 360
             P +
Sbjct: 683 FVPQN 687


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,296,671
Number of Sequences: 53049
Number of extensions: 941872
Number of successful extensions: 2432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2432
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)