Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H08
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 33 0.25
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 31 1.4
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 30 1.8
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 30 1.8
Z83103-1|CAB05474.1| 358|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 29 5.5
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 29 5.5
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 29 5.5
AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm (myotubu... 29 5.5
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 28 7.2
Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein. 28 9.5
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 518 CPRLPRAAEVSVDCVRLAVKQYSPQVALPGSRFNVTIVAAHANGFSKVCCPSSYRSSALT 339
CP+L + DC+ L V Y+PQ + +V ++ +NGFS C + ++
Sbjct: 104 CPQLNAGGPTNEDCLYLNV--YTPQAGNTNANLSVLVLIDGSNGFSNGGCDQNQEKGIIS 161
Query: 338 AL 333
L
Sbjct: 162 NL 163
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -3
Query: 352 LQR*QH*ELYE--PLWDYLHAALASRNVGIRSIWIADMAHSGS*SSAQQIIPIHGE*VQN 179
L R Q EL+E PL DY+ + +VG R D+A Q++P GE VQN
Sbjct: 347 LLRQQDMELFEDEPL-DYMKRDIEGTDVGTRRRGAIDLARGLCRRFEAQMLPCLGEIVQN 405
Query: 178 SFGHYSYVHSLTIVIESIMARSCRRSPAR 92
G ++ + IV I A + + A+
Sbjct: 406 LLGSGDWI-KIDIVYSLITAIAVKTETAK 433
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 95 TS*NTLVLRCSSLSLVWDTAWEADLQG 15
TS N+ + +CS+ S + TAW DL+G
Sbjct: 256 TSANSSISKCSNCSTIKTTAWRRDLEG 282
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 95 TS*NTLVLRCSSLSLVWDTAWEADLQG 15
TS N+ + +CS+ S + TAW DL+G
Sbjct: 256 TSANSSISKCSNCSTIKTTAWRRDLEG 282
>Z83103-1|CAB05474.1| 358|Caenorhabditis elegans Hypothetical
protein D1025.1 protein.
Length = 358
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 617 VHRSHVRSALVRSGILIPSGLMSPLNVQEHVVLCPR 510
+HRS++ L R +L+P+ ++ + H V+CP+
Sbjct: 133 MHRSNIAIRLKRELLLLPNSIVVNKSKLVHAVICPK 168
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 779 DISKVPRXVLRLYNPRLSPDSEYVP 705
DIS VP+ + R +NPR+ P++ P
Sbjct: 145 DISNVPQHINRQFNPRMGPNTSPNP 169
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 779 DISKVPRXVLRLYNPRLSPDSEYVP 705
DIS VP+ + R +NPR+ P++ P
Sbjct: 145 DISNVPQHINRQFNPRMGPNTSPNP 169
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 779 DISKVPRXVLRLYNPRLSPDSEYVP 705
DIS VP+ + R +NPR+ P++ P
Sbjct: 143 DISNVPQHINRQFNPRMGPNTSPNP 167
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 779 DISKVPRXVLRLYNPRLSPDSEYVP 705
DIS VP+ + R +NPR+ P++ P
Sbjct: 94 DISNVPQHINRQFNPRMGPNTSPNP 118
>AC006708-19|AAF60423.3| 588|Caenorhabditis elegans Mtm
(myotubularin) family protein 1 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 719 SEYVPNVDSPVCMVHMLLQYYNTQNPCVARP 627
S V NV+ +C +H+ + YY NP V P
Sbjct: 523 SNKVINVNPSLCGLHVWIDYYARSNPYVVTP 553
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 575 CPSVPMPIARGICELIRQVVL---HRGFGYCSTGEACEPCKQ 691
C + P+ +A CE V G G+CS+GE C P +Q
Sbjct: 652 CTNTPLRLALKTCEEQTDCVSCASKSGCGWCSSGEQCLPNEQ 693
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 575 CPSVPMPIARGICELIRQVVL---HRGFGYCSTGEACEPCKQ 691
C + P+ +A CE V G G+CS+GE C P +Q
Sbjct: 652 CTNTPLRLALKTCEEQTDCVSCASKSGCGWCSSGEQCLPNEQ 693
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 575 CPSVPMPIARGICELIRQVVL---HRGFGYCSTGEACEPCKQ 691
C + P+ +A CE V G G+CS+GE C P +Q
Sbjct: 652 CTNTPLRLALKTCEEQTDCVSCASKSGCGWCSSGEQCLPNEQ 693
>Z81128-1|CAB03398.1| 568|Caenorhabditis elegans Hypothetical
protein T23D8.1 protein.
Length = 568
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 681 GSHAS-PVLQYPKPLCSTTCRISSQIP 604
GSH S P+L P CS TC +Q+P
Sbjct: 190 GSHFSLPLLSGRLPECSLTCEADNQVP 216
>AF013953-1|AAC47750.1| 568|Caenorhabditis elegans mom-5 protein.
Length = 568
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 681 GSHAS-PVLQYPKPLCSTTCRISSQIP 604
GSH S P+L P CS TC +Q+P
Sbjct: 190 GSHFSLPLLSGRLPECSLTCEADNQVP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,673,783
Number of Sequences: 27780
Number of extensions: 459924
Number of successful extensions: 1270
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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