Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H08
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    23   2.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    23   2.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.1  

>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 495 CRSRQTRTQNHMLLHVKRGHQARWYQYARAY 587
           C   +TR    +L H++R +   W +  + Y
Sbjct: 83  CSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 495 CRSRQTRTQNHMLLHVKRGHQARWYQYARAY 587
           C   +TR    +L H++R +   W +  + Y
Sbjct: 83  CSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 310 DYLHAALASRNVGIRSIWIADMAHSG 233
           +Y+H  LA+RNV + +  +  +A  G
Sbjct: 755 NYVHRDLAARNVLVNAALVCKIADFG 780


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/52 (25%), Positives = 18/52 (34%)
 Frame = +1

Query: 10  CMPCRSASHAVSHTNDRLLHLSTKVFYDVQEIVCMILP*CFRLQSSANEHTS 165
           C  C      +S       H   + F  +   VC +    FR  +S N H S
Sbjct: 371 CYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKS 422


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 636 STTCRISSQIPRAIGIGTLGHTDTIWLDVPS*RAGA 529
           ST  R+S+  P A  I T  + +   LD  S R G+
Sbjct: 620 STEKRVSAGTPAAFNISTTIYENQNCLDASSSRRGS 655


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 621 SGRSCYTGVLGIVVLEKHVNHANRRVNVGH 710
           S R  Y GV  +     HV+HAN    +GH
Sbjct: 265 SRRKNYGGVYHLD--NHHVHHANHHAILGH 292


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 187  VQNSFGHYSYVHSLTI 140
            V+N+FGH +  H L +
Sbjct: 1348 VENTFGHDTVTHQLIV 1363


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -1

Query: 744 VQSPIIARLRICAQ----R*LACLHGSHASPVLQYPKPLCSTTCRISSQIPR 601
           V+  ++++L I  Q    R  A +H  H +  +  P+P  S+     S IP+
Sbjct: 318 VRMQVVSQLEIQLQKERDRLTAMMHHLHVAKQMASPEPPKSSESSTGSSIPK 369


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,087
Number of Sequences: 438
Number of extensions: 5103
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)