Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H07
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   106   2e-23
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    54   2e-07
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    30   2.4  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   4.2  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.4  
U39677-3|AAC47957.2|  565|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.4  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    28   9.7  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    28   9.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  106 bits (255), Expect = 2e-23
 Identities = 49/72 (68%), Positives = 56/72 (77%)
 Frame = +1

Query: 313 ALLKYMSSGPVVPMVWEGLNVVKTGRKXPGATNPTDSXPGTIRGDLWIQXGRNIIHGSDT 492
           +L++YMSSGPVV MVW+GL+VVK GR   GATNP  S PGTIRGD  IQ GRNI HGSD 
Sbjct: 63  SLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDA 122

Query: 493 VESAXKEIGLWF 528
           V+SA +EI  WF
Sbjct: 123 VDSANREIAHWF 134



 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = +3

Query: 138 ERTFIMVXPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLXQHYSDLASRPFFP 311
           ERTFI + PDGV RGLVG II RFE++G+KLV LK +  S+  L  HY DL  +PFFP
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP 62


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 31/75 (41%), Positives = 41/75 (54%)
 Frame = +1

Query: 316 LLKYMSSGPVVPMVWEGLNVVKTGRKXPGATNPTDSXPGTIRGDLWIQXGRNIIHGSDTV 495
           L+ YMSSGPVV M+WEG +VVK  R   G          +I  DL ++      H SD+V
Sbjct: 39  LIDYMSSGPVVAMLWEGCDVVKRARVILGEELEVGEF-RSIFYDLVVRDTHKGCHCSDSV 97

Query: 496 ESAXKEIGLWFTDXR 540
            SA +E  LWF + +
Sbjct: 98  ASANREYVLWFEEFK 112


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +2

Query: 680 PPXPPXPXPXXXPXXXXXPRPPXXPXMXGSXXPP 781
           PP PP P P         P PP  P M G   PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPP--PPMLGGPPPP 592


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 680 PPXPPXPXPXXXPXXXXXPRPPXXP 754
           PP PP P P   P     P PP  P
Sbjct: 28  PPCPPPPPPMCAPPPLPCPPPPICP 52


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPPXXPXMXGSXXPP 781
           P+ P    PP PP   P   P     P  P  P       PP
Sbjct: 82  PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPP 123


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPP---XXPXMXGSXXPP 781
           P  P  T  P PP P     P     P PP     P + G   PP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPP---XXPXMXGSXXPP 781
           P  P  T  P PP P     P     P PP     P + G   PP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761


>U39677-3|AAC47957.2|  565|Caenorhabditis elegans Hypothetical
           protein C16E9.1 protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/42 (30%), Positives = 14/42 (33%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPPXXPXMXGSXXPP 781
           P+ P    PP PP   P   P       P   P   G   PP
Sbjct: 29  PYNPPGYMPPMPPTDPPGYDPDSTFDTTPTPAPPSNGLRAPP 70


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPP---XXPXMXGSXXPP 781
           P  P  T  P PP P     P     P PP     P + G   PP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 791 GXGXGGXXTPP*XGXXGAXGXGXXGGXXXGXVGGAXXG 678
           G G GG   PP        G G  GG   G  GG   G
Sbjct: 102 GGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +2

Query: 680 PPXPPXPXPXXXP-XXXXXPRPPXXPXMXGSXXP 778
           PP PP P P   P      P PP  P   G+  P
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +2

Query: 680 PPXPPXPXPXXXP-XXXXXPRPPXXPXMXGSXXP 778
           PP PP P P   P      P PP  P   G+  P
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +2

Query: 656 PHFPXXTXPPXPPXPXPXXXPXXXXXPRPPXXPXM 760
           P  P    P  PP P P   P     P PP  P +
Sbjct: 164 PPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRL 198


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 659 HFPXXTXPPXPPXPXPXXXPXXXXXPRPP 745
           H    + PP PP P P   P     P PP
Sbjct: 148 HGATSSAPPPPPPPPPVSVPSSKPTPPPP 176


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +2

Query: 659 HFPXXTXPPXPPXPXPXXXPXXXXXPRPP 745
           H    + PP PP P P   P     P PP
Sbjct: 148 HGATSSAPPPPPPPPPVSVPSSKPTPPPP 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,242,593
Number of Sequences: 27780
Number of extensions: 255172
Number of successful extensions: 1237
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)