Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_H04
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0391 - 23740603-23740665,23740805-23740927,23741009-237411...    30   2.8  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     29   4.9  
12_02_0082 - 13372997-13373863,13373928-13374386                       29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482...    28   8.6  

>03_05_0391 -
           23740603-23740665,23740805-23740927,23741009-23741148,
           23741209-23741264,23742005-23742262,23743290-23743627
          Length = 325

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -2

Query: 812 EXGGFGAHR-PSLEGNDLHRXEIPTXXSXEKGATXSPKGERRTGIR*AAGFGTGERTRE 639
           E      HR P L G+   R E       E+  T + KGER       +G GTG R RE
Sbjct: 144 EANAVAQHRAPGLRGDGARRREADAGVEVER-ETAARKGERAQPRGFTSGGGTGRRWRE 201


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/83 (25%), Positives = 28/83 (33%)
 Frame = +1

Query: 589 WRXPTGLXRYQAFPPGSSLVRSPVPNPAAYRIPVRLSPFGEXVAPFS*LXXVGISXRCRS 768
           W  P     Y   PPGSS+   P P P     P     +    AP         +   ++
Sbjct: 436 WGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAPSTDGAQN 495

Query: 769 FPSKLGLCAPNPPXSXRPXXPYP 837
           +P  +      PP S  P  P P
Sbjct: 496 YPPGV-----TPPSSGAPTQPVP 513


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +2

Query: 644 SCALLFRTLPLTGYLSAFLPSGXPWRLSXSSRX*VSXFGVGRSPPSWACVXQTP 805
           SCALLF  +PL G     LPS    R S  +   VS   V  +P + A +   P
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS-IDCRYSTKASIPVSPIAVDVTPLALAPLTSQP 216


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_05_0077 +
           25645730-25645993,25647172-25647648,25648027-25648237,
           25648407-25648564,25648641-25648711,25648829-25648934,
           25649008-25649094,25649701-25650252,25650337-25650403,
           25650971-25651104,25651175-25651228,25651376-25651472,
           25652007-25652212,25652287-25652367,25652543-25652608,
           25653025-25653098,25653766-25653871
          Length = 936

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 691 RLSPFGEXVAPFS*LXXVGISXRCRSFPSKLGLCAPNPP 807
           RLSP  E   P + +  V +  RC    S+L   A  PP
Sbjct: 35  RLSPPSERCQPLAVMHTVAVGARCLVMESRLPKAADEPP 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,732,061
Number of Sequences: 37544
Number of extensions: 482341
Number of successful extensions: 1353
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)