Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_H02
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 167 1e-41
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 162 3e-40
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 35 0.095
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.17
05_07_0234 - 28566846-28567766 30 2.0
03_05_0366 - 23505755-23506441 30 2.0
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 30 2.7
03_01_0092 - 731069-731434,731569-733080 30 2.7
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 3.6
11_01_0411 - 3114959-3115000,3115504-3116703 29 6.2
07_03_1721 - 29023979-29025295 29 6.2
03_05_0452 + 24464134-24464442 29 6.2
02_04_0457 + 23093020-23093343,23093798-23093806 29 6.2
10_07_0029 + 12031711-12032464,12044289-12044386 28 8.3
04_01_0588 + 7657510-7657992,7658397-7658843 28 8.3
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 8.3
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 167 bits (406), Expect = 1e-41
Identities = 77/126 (61%), Positives = 87/126 (69%)
Frame = +1
Query: 220 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 399
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 400 SGRGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 579
+G+GAFGNMCRGGRMFAPTK WR+WH ARGH IE
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIET 150
Query: 580 IPXLPL 597
+P LPL
Sbjct: 151 VPELPL 156
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 162 bits (394), Expect = 3e-40
Identities = 76/126 (60%), Positives = 84/126 (66%)
Frame = +1
Query: 220 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 399
V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 30 VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 89
Query: 400 SGRGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 579
+G+GAFGNMCRGGRMFAPTK WRRWH ARGH IE
Sbjct: 90 AGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEG 149
Query: 580 IPXLPL 597
+P PL
Sbjct: 150 VPEFPL 155
Score = 42.3 bits (95), Expect = 5e-04
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = +2
Query: 521 PLLLLASQRSFRLEDTLLKRFPSFPLVVADKVHEIXKTQXAVIFPEAPSXPWSDILKVYX 700
P L+LA R R+E P FPLVV+D + I KT ++ + ++D K
Sbjct: 137 PSLVLA--RGHRIEGV-----PEFPLVVSDSIESIEKTAQSIKVLK-QIGAYADAEKTKD 188
Query: 701 SQRLXAGTGKMRXRRPIQRK 760
S + AG GKMR RR I RK
Sbjct: 189 SVAIRAGKGKMRNRRYINRK 208
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 34.7 bits (76), Expect = 0.095
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 437 PPRHMLPKAPRPDLWVPPP 381
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 331 AESWGTGRAVARIPRVRGGGTHRSGRGAFGNMCRGGR 441
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>05_07_0234 - 28566846-28567766
Length = 306
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 615 TLSATTKGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDATVPAPP 463
T+ T+G LG LF S +RW S+S+ +P S+ APP
Sbjct: 102 TVPPRTRGPLGRLFLEESRGSFDRWSTSTSSS-SSSSAPASDEGGLDGAPP 151
>03_05_0366 - 23505755-23506441
Length = 228
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 217 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 393
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 394 H 396
+
Sbjct: 168 N 168
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 300 AVGLPRVLGHRNVNIIDQVRTYGRLEYEXGGAWLHPAPSHSSLNTPTLKV 151
A P+++ ++ DQ G LE G HPAP + SL +P LKV
Sbjct: 47 ACNQPKLILQLESHLKDQQVVRGALEKALGPDPDHPAPVNLSLESPMLKV 96
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 434 PRHMLPKAPRPDLWVPPPRTRGIRATARPVP 342
P H++P P+P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -1
Query: 440 RPPR--HMLPKAPRPDLWVPPPRTRGIRAT-ARPVP 342
RPPR H +P P P L PPP I T A P+P
Sbjct: 80 RPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLP 115
>11_01_0411 - 3114959-3115000,3115504-3116703
Length = 413
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 422 LPKAPRPDLWVPPPRTRGIRATARPVPHDSALV-W*PASL 306
+P P P LW+P P A P+ H S+L W P +L
Sbjct: 276 VPCPPAPPLWLPSPSVPSSLALHVPLFHASSLERWSPTAL 315
>07_03_1721 - 29023979-29025295
Length = 438
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 461 GFVGANIRPPRHMLPKAPRPDLWVP-PPRTRGIRATARPV 345
G VG + PP H +P P P P P GI A A PV
Sbjct: 228 GIVGHSGVPPMHPIPCFPGPPFVYPWSPAWNGIPAMAPPV 267
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 273 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 374
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 316 GHQTSAESWGTGRAVARIPRVRGGGTHRSGRGAFG 420
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 442 YVHHDTCYRRHPDRTYG 392
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +1
Query: 253 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGRGAFGN 423
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 424 MCRGGRMFAPTKPWRRW 474
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 419 PKAPRPDLWVPPPRTRGIRATARPVPHDSA 330
P+A + PPPRTR + PVP SA
Sbjct: 156 PQAQQHQQRPPPPRTRQVNPAPPPVPSPSA 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,276,092
Number of Sequences: 37544
Number of extensions: 506337
Number of successful extensions: 2026
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2015
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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