Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_G24
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.29 
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 90  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 179
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 22/78 (28%), Positives = 24/78 (30%)
 Frame = -3

Query: 744 GXGXLXGLRGGXXFGXTGXXNVXGVXGCLPXGTSXCRRXVXGVNSIFXTSXIGXGRSQWG 565
           G G   G  GG   G +G     G  GC   G   C     G          G G    G
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195

Query: 564 VXGXXGYPLGCFGXSGXG 511
             G  GY +   G  G G
Sbjct: 196 SSGGGGYAVAPSGGGGCG 213


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 22/78 (28%), Positives = 24/78 (30%)
 Frame = -3

Query: 744 GXGXLXGLRGGXXFGXTGXXNVXGVXGCLPXGTSXCRRXVXGVNSIFXTSXIGXGRSQWG 565
           G G   G  GG   G +G     G  GC   G   C     G          G G    G
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195

Query: 564 VXGXXGYPLGCFGXSGXG 511
             G  GY +   G  G G
Sbjct: 196 SSGGGGYAVAPSGGGGCG 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,658
Number of Sequences: 27780
Number of extensions: 244927
Number of successful extensions: 591
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)