Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_G21
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389...    30   2.1  

>04_03_0744 +
           19237901-19237912,19238119-19238611,19238860-19238928,
           19239124-19239140,19239260-19239357,19240019-19240156,
           19240710-19240899,19241175-19241307,19241505-19242442
          Length = 695

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 24  IGNSLRFDNFNIFACDNS*SYKNEILHDFRPRSAGYG 134
           +G+S  FDNF  F  +   ++KN    +F P   GYG
Sbjct: 256 VGDSCGFDNFPSFGIE---AFKNTFYFNFNPSYVGYG 289


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,491,554
Number of Sequences: 37544
Number of extensions: 357736
Number of successful extensions: 794
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)