Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G18
(888 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 60 5e-10
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 37 0.004
SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch... 30 0.51
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 30 0.51
SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces po... 27 2.7
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 6.2
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 26 8.2
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 26 8.2
>SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 199
Score = 59.7 bits (138), Expect = 5e-10
Identities = 47/165 (28%), Positives = 68/165 (41%)
Frame = +2
Query: 206 IFSLYYVLNGKGEQISLGWFLENTSPXYVGYPRNRLFRCPGPLSEQPWASTLLVSA*WEE 385
I LY + + GE G FL +TSP G G + W + ++
Sbjct: 17 IVGLYMLFHNSGESFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAA-WGIFICGTSILGG 75
Query: 386 VSKHLESRLRI*SPVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMF 565
K + + +IFCE VAIY LI AIV S K ++ + + ++ G+ +F
Sbjct: 76 AVKAPRIKTKNLISIIFCEVVAIYSLIIAIVFSA---KINDINPAGFYTKSHYYTGFALF 132
Query: 566 GAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXXVKILIVEIFG 700
G+ VGL NL C VK+L+VEIFG
Sbjct: 133 WGGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFG 177
Score = 50.8 bits (116), Expect = 3e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 325 WSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLIS 426
+ ++GAA GI G SI+GG VKAPRIKTKNLIS
Sbjct: 56 FGIIGAAWGIFICGTSILGGAVKAPRIKTKNLIS 89
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNL 598
PV+ +AIYGL+ ++++SG L++ + +G++ GAGL+VGL L
Sbjct: 57 PVVMAGIIAIYGLVVSVLISGNLKQILSLY-----------SGFIQLGAGLSVGLAGL 103
>SPAC732.01 |vma11||V-type ATPase proteolipid
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNL 598
PV+ + +YGL+ +++++G + P S+ +G++ AGLAVGL +
Sbjct: 57 PVVMSGIIGVYGLVMSVLIAGDM----SPDNDYSL-----FSGFIHLSAGLAVGLTGV 105
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 29.9 bits (64), Expect = 0.51
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 664 GSVGSIR*SSTRAHDTNSNSTE*IHQANSESSAEHHV-SRHPVL 536
GSV + SS R + T +NS S+AE+HV SRH V+
Sbjct: 830 GSVSDVSFSSIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAVI 873
>SPCC16C4.18c |taf50||histone H4-like TAF |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 452
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 158 YFLSYLFVLLVGLAIPIF-SLYYVLNGKGEQISLGWFLENTSPXYVGY 298
Y L L L+G+ F ++YY L + + +L FL+NT P Y
Sbjct: 302 YALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHY 349
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2
Query: 125 TKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLN 232
+ ++N+N+ +R ++S++ + +A SLY+ LN
Sbjct: 2008 SSFINENMYLRLWISHIASWIYAVASASGSLYFSLN 2043
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 349 PWLLRQRTRATEKAIPRVPHIXRGSVLQEPSQTYLLTL 236
PWLLRQ+ T I +VP R S +T+ TL
Sbjct: 1255 PWLLRQQYIDTLYTIHQVPTTQRESSALPSDKTFDFTL 1292
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 446 VAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAG 553
++I + A +LS L Y+EPF +S KQ + G
Sbjct: 74 LSIIAICFACLLSPSLRPYAEPFIFLSYKQPDGSYG 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,390,947
Number of Sequences: 5004
Number of extensions: 70118
Number of successful extensions: 206
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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