Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G18
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 77 2e-14
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 38 0.010
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 38 0.010
Z46266-7|CAH60751.1| 470|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z46266-6|CAA86411.2| 515|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 31 0.83
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 31 0.83
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 31 0.83
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 2.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 2.5
Z81102-1|CAB03202.1| 320|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 28 7.8
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 28 7.8
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 76.6 bits (180), Expect = 2e-14
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 215 LYYVLNGKGEQISLGWFLENTSPX-YVGYPRNRLFRCPGPLSEQPWASTLLVSA*WEEVS 391
L+Y+L+G+G + +GWFL +TSP + G F + W S+
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIG--FSLSLSVLGAGWGIFTTGSSILGGGV 83
Query: 392 KHLESRLRI*SPVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGY 556
K R + +IFCEAVAI+G+I A V G L ++ P T +++ +N +GY
Sbjct: 84 KAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGY 143
Query: 557 VMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXXVKILIVEIF 697
++FG GL VGL NL C VKILI+EIF
Sbjct: 144 MIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIF 190
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 313 FPLPWSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLIS 426
F L SV+GA GI TTG SI+GGGVKAPRI+TKNL+S
Sbjct: 58 FSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVS 95
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 76.6 bits (180), Expect = 2e-14
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 215 LYYVLNGKGEQISLGWFLENTSPX-YVGYPRNRLFRCPGPLSEQPWASTLLVSA*WEEVS 391
L+Y+L+G+G + +GWFL +TSP + G F + W S+
Sbjct: 26 LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIG--FSLSLSVLGAGWGIFTTGSSILGGGV 83
Query: 392 KHLESRLRI*SPVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGY 556
K R + +IFCEAVAI+G+I A V G L ++ P T +++ +N +GY
Sbjct: 84 KAPRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGY 143
Query: 557 VMFGAGLAVGLVNLFCXXXXXXXXXXXXXXXXXXXXXXVKILIVEIF 697
++FG GL VGL NL C VKILI+EIF
Sbjct: 144 MIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIF 190
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +1
Query: 313 FPLPWSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLIS 426
F L SV+GA GI TTG SI+GGGVKAPRI+TKNL+S
Sbjct: 58 FSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVS 95
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQ---NWMAGYVMFGAGLAVGL 589
PV+ VAIYGL+ A+++SG +E +T + Q + G GAG A+G+
Sbjct: 69 PVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGI 126
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQ---NWMAGYVMFGAGLAVGL 589
PV+ VAIYGL+ A+++SG +E +T + Q + G GAG A+G+
Sbjct: 69 PVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGI 126
>Z46266-7|CAH60751.1| 470|Caenorhabditis elegans Hypothetical
protein C07B5.4b protein.
Length = 470
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -3
Query: 340 LRQRTRATEKAIPRVPHIXRGSVLQEPSQTYLLTLSI-EDVVQRKY 206
++QR + + + P R S++ EPS Y++ L+I EDV++ +Y
Sbjct: 375 VKQRAKVIDFFQAQSPKPSRKSIIHEPSSNYVIQLNIGEDVMENEY 420
>Z46266-6|CAA86411.2| 515|Caenorhabditis elegans Hypothetical
protein C07B5.4a protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -3
Query: 340 LRQRTRATEKAIPRVPHIXRGSVLQEPSQTYLLTLSI-EDVVQRKY 206
++QR + + + P R S++ EPS Y++ L+I EDV++ +Y
Sbjct: 420 VKQRAKVIDFFQAQSPKPSRKSIIHEPSSNYVIQLNIGEDVMENEY 465
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPF---TSVSVKQQNWMAGYVMFGAGLAVGLV 592
PVI + IYGL+ A+VL G + S + + G GAG A+G+V
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIV 119
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPF---TSVSVKQQNWMAGYVMFGAGLAVGLV 592
PVI + IYGL+ A+VL G + S + + G GAG A+G+V
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIV 119
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPF---TSVSVKQQNWMAGYVMFGAGLAVGLV 592
PVI + IYGL+ A+VL G + S + + G GAG A+G+V
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIV 119
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPF---TSVSVKQQNWMAGYVMFGAGLAVGLV 592
PVI + IYGL+ A+VL G + S + + G GAG A+G+V
Sbjct: 61 PVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIV 119
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 337 RQRTRATEKAIPRVPHIXRGSVLQEPSQTYLLTLSIEDVVQR 212
R R T+ +P +P I + ++ YLL L IED ++
Sbjct: 191 RSRWSTTKSFVPGMPTILPADLTEDQRNAYLLQLEIEDATRK 232
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 337 RQRTRATEKAIPRVPHIXRGSVLQEPSQTYLLTLSIEDVVQR 212
R R T+ +P +P I + ++ YLL L IED ++
Sbjct: 191 RSRWSTTKSFVPGMPTILPADLTEDQRNAYLLQLEIEDATRK 232
>Z81102-1|CAB03202.1| 320|Caenorhabditis elegans Hypothetical
protein M02B1.3 protein.
Length = 320
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 347 WASTLLVSA*WEEVSKHLE-SRLRI*SPVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSV 523
WA + VS+ + L S+L S + F + V+ LIT IV G ++ + + V
Sbjct: 186 WAMLMEVSSIFLHTRSILHISKLSTTSMIGFSKVVSYLNLITFIVFRGFVQFFLFGWAWV 245
Query: 524 SVKQQNWMAGYVMFGAGLAVGLVNL 598
+ +++ + FG G ++N+
Sbjct: 246 NYDHIHFIFKCIAFGGGFCFAVINV 270
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 164 LSYLFVLLVGLAIPIFSLYYVLNGKG 241
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 164 LSYLFVLLVGLAIPIFSLYYVLNGKG 241
L + LL LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,845,776
Number of Sequences: 27780
Number of extensions: 401409
Number of successful extensions: 1308
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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