Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_G18
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    39   5e-05
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    27   0.23 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.40 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   2.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   2.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   2.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   4.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.6  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 24/58 (41%), Positives = 32/58 (55%)
 Frame = +2

Query: 425 PVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNL 598
           PV+    +AIYGL+ A++++G LE   EP      K      G+V  GAGLAVG   L
Sbjct: 57  PVVMAGIIAIYGLVVAVLIAGGLE---EP------KGYTLFKGFVHLGAGLAVGFSGL 105


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
 Frame = +2

Query: 161 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTSPXYVGYPRNRL 313
           F S+L F+LLV +A+ +++   V N         K ++I  G+FL + S  ++ + +  L
Sbjct: 84  FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNL 143

Query: 314 FRC 322
             C
Sbjct: 144 QCC 146


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 665  RQRWQHPLEQHQSPRYQQQFHRIDSPSQQR 576
            +Q+ Q P +Q   P+ QQQ  +   P QQ+
Sbjct: 1518 QQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ 1547



 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 650 HPLEQHQSPRYQQQFHRIDSPSQQRVQ 570
           HP  Q Q+   QQQ  +   P QQ+ Q
Sbjct: 821 HPQAQAQAQPQQQQQQQQQQPQQQQQQ 847



 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 665  RQRWQHPLEQHQSPRYQQQFHRIDSPSQQRVQ 570
            +Q+ Q P +Q Q P+ QQ   +     QQ+ Q
Sbjct: 1511 QQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQ 1542



 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 653  QHPLEQHQSPRYQQQFHRIDSPSQQRVQ 570
            Q P +Q Q  + QQ   +   P QQ+ Q
Sbjct: 1503 QQPQQQQQQQQQQQPQQQSQQPQQQQPQ 1530



 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 638  QHQSPRYQQQFHRIDSPSQQRVQ 570
            Q Q P+ QQQ  +   P QQ  Q
Sbjct: 1501 QQQQPQQQQQQQQQQQPQQQSQQ 1523


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 544 DGGIRDVRRWTRCWLG 591
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 544 DGGIRDVRRWTRCWLG 591
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 544 DGGIRDVRRWTRCWLG 591
           DGG  ++  W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 487 TREHDSSDQTVNGDGLAE 434
           TREH S + T++ DG+ E
Sbjct: 349 TREHPSRNFTMSEDGMIE 366


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 111 VNPERDGLFSPDFCLDKKTQNGEQILRIPYS 19
           + P  D +F PD  L +KT N      +P+S
Sbjct: 453 IYPNPD-VFDPDNFLPEKTANRHYYAFVPFS 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,846
Number of Sequences: 438
Number of extensions: 5042
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)