Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G17
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 40 0.003
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 39 0.004
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.031
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 36 0.041
Z74031-7|CAA98458.1| 68|Caenorhabditis elegans Hypothetical pr... 35 0.072
U53785-1|AAC47274.1| 68|Caenorhabditis elegans Sec61p gamma ho... 35 0.072
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.39
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 32 0.51
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.67
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.67
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.89
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 31 1.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 2.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 4.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 8.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.3
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 8.3
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 28 8.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 8.3
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 757 FFFFXXXGGGGGGGXXXXKKXXXPPXXXGXGFGXPPXPXPPP 882
F F GGGGGGG PP G PP P PPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGGG GGG PPPPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGG GGGG PPPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 781 GGGGGGXXXXKKXXXPPXXXGXGFG 855
GGGGGG PP G G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 757 FFFFXXXGGGGGGG 798
F F GGGGGGG
Sbjct: 20 FLFPSAGGGGGGGG 33
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGGG GGG PPPPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGG GGGG PPPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 781 GGGGGGXXXXKKXXXPPXXXGXGFG 855
GGGGGG PP G G G
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCG 84
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 757 FFFFXXXGGGGGGG 798
F F GGGGGGG
Sbjct: 20 FLFPSAGGGGGGGG 33
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXPXXXXXG 922
PPPP G + G PPPP PP PP P G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 788 GGGXXFXXKKXXPPPPRGXXXLGXPPPPXPPXNXXPP 898
GG PPPP G + PPP PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP G + PPP PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 824 PPPPRG--XXXLGXPPPPXPPXNXXP 895
PPPP G G PPPP PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXPXXXXXG 922
PPPP G + G PPPP PP PP P G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 788 GGGXXFXXKKXXPPPPRGXXXLGXPPPPXPPXNXXPP 898
GG PPPP G + PPP PP PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP G + PPP PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P P
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 824 PPPPRG--XXXLGXPPPPXPPXNXXP 895
PPPP G G PPPP PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.010
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXPXXXXXG 922
PPPP G + G PPPP PP PP P G
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 788 GGGXXFXXKKXXPPPPRGXXXLGXPPPPXPPXNXXPP 898
GG PPPP G + PPP PP PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP G + PPP PP PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P P
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 824 PPPPRG--XXXLGXPPPPXPPXNXXP 895
PPPP G G PPPP PP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G PPPP PP P
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGGG G GG PPPPPP
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG GGGG GGGG PPPPPP
Sbjct: 26 GGGGGGCGGGCGGGGG------CGGGGGC--GGGCAPPPPPP 59
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 760 FFFXXXGGGGGGGXXXXKKXXXPPXXXGXGFGXPPXPXPPP 882
F F GGGGGGG G G G P PPP
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPP 58
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGG 823
G GG GG GGG P P GGG
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGG 823
G GG GG GGG P P GGG
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGG 121
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 35.9 bits (79), Expect = 0.041
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXX---PPPPPP 778
G GG GG GGGG GGGG + PPPPPP
Sbjct: 27 GAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPP 71
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 778 GGGGGGGXXXXKKXXXPPXXXGXGFGXPPXPXPPP 882
GGGG GG G G G PP P PPP
Sbjct: 39 GGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPP 73
>Z74031-7|CAA98458.1| 68|Caenorhabditis elegans Hypothetical
protein F32D8.6 protein.
Length = 68
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 198 PDRKEFQKIAIATAXXXXXXXXXXXXXKLXHIP 296
PDRKE+QKIA+ATA KL HIP
Sbjct: 28 PDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 149 KQFAKDSIRLVRRCTKP 199
+QF+KDS RLV+RCTKP
Sbjct: 12 RQFSKDSYRLVKRCTKP 28
>U53785-1|AAC47274.1| 68|Caenorhabditis elegans Sec61p gamma
homolog protein.
Length = 68
Score = 35.1 bits (77), Expect = 0.072
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 198 PDRKEFQKIAIATAXXXXXXXXXXXXXKLXHIP 296
PDRKE+QKIA+ATA KL HIP
Sbjct: 28 PDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 149 KQFAKDSIRLVRRCTKP 199
+QF+KDS RLV+RCTKP
Sbjct: 12 RQFSKDSYRLVKRCTKP 28
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +2
Query: 827 PPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPR LG PPP PP N PP P
Sbjct: 1592 PPPR----LGMPPPGPPPPNGGPPPP 1613
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPP----PXPPXNXXPPXPXXXXXG 922
PPPPRG PPP P P PP P G
Sbjct: 1573 PPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG 1609
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP PPPP PP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPP 1362
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP LG PPPP PP
Sbjct: 577 PPPPPPPPMLGGPPPPPPP 595
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXN--XXPPXPXXXXXG 922
PPPP G PPPP PP PP P G
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP G PPPP PP P
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +2
Query: 758 FFFXFXXGGGGG-----GXXFXXKKXXPPPPRGXXXLGXPPPPXPPXNXXPPXP 904
F F F GGG G G PPPP + PPPP P PP P
Sbjct: 216 FLFGFGGGGGCGCGSSCGGCNMGCSCLPPPP-SPVCMPPPPPPCPMPIPCPPPP 268
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXP 904
PPPP+G L G PP PP PP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXP 895
PPPPR G PPPP PP P
Sbjct: 289 PPPPRA----GSPPPPPPPRGSPP 308
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPP-----XPPXNXXPPXP 904
PPPPRG G PPP PP P P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G G PPPP PP P
Sbjct: 281 PPPPAG----GSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXP 904
PPPP+G L G PP PP PP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXP 895
PPPPR G PPPP PP P
Sbjct: 310 PPPPRA----GSPPPPPPPRGSPP 329
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPP-----XPPXNXXPPXP 904
PPPPRG G PPP PP P P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G G PPPP PP P
Sbjct: 302 PPPPAG----GSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 824 PPPPRGXXXL-GXPPPPXPPXNXXPPXP 904
PPPP+G L G PP PP PP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXP 895
PPPPR G PPPP PP P
Sbjct: 295 PPPPRA----GSPPPPPPPRGSPP 314
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPP-----XPPXNXXPPXP 904
PPPPRG G PPP PP P P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP G G PPPP PP P
Sbjct: 287 PPPPAG----GSPPPPRAGSPPPPPPP 309
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP+G G PPPP P
Sbjct: 681 PPPPQGQQYYGGPPPPGQP 699
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXP------PXNXXPPXP 904
PPPP+ G PPPP P P PP P
Sbjct: 723 PPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPP 755
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP+G G PPPP P
Sbjct: 681 PPPPQGQQYYGGPPPPGQP 699
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXP------PXNXXPPXP 904
PPPP+ G PPPP P P PP P
Sbjct: 723 PPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPP 755
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP G G PP PP PP
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPP 459
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 815 KXXPPPPRGXXXLGXPPP-PXPP 880
K PPPP+ +G PPP P PP
Sbjct: 26 KKKPPPPKSASKMGPPPPAPAPP 48
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGG 823
G GG GG GGGG RGGGG
Sbjct: 106 GGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 897 GGXXXXGGXGGGGXPKXXXPRGGGG 823
GG GG GGGG RGGGG
Sbjct: 91 GGGRGGGGGGGGGRGGGGGGRGGGG 115
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 815 KXXPPPPRGXXXLGXPPP-PXPP 880
K PPPP+ +G PPP P PP
Sbjct: 26 KKKPPPPKSASKMGPPPPAPAPP 48
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G PPPP PP
Sbjct: 235 PPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G PPPP PP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G PPPP PP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 870 GGGGXP--KXXXPRGGGGXXFFXXXXXPPPPPP 778
GGG P GGGG + PPPPPP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPP 68
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 870 GGGGXP--KXXXPRGGGGXXFFXXXXXPPPPPP 778
GGG P GGGG + PPPPPP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPP 68
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 634 GGGXXPXXXXXFFGGXXPPPPXXKXXPRPP 545
G G P F GG PPPP P PP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 743 PXXFXFFFXFXXGGGGGGXXFXXKKXXPPPPRGXXXLGXPPPPXPPXNXXP-PXP 904
P F + GGGGGG + PPPP P P P P P P
Sbjct: 70 PPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEP 124
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G PPPP PP
Sbjct: 796 PPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G PPPP PP
Sbjct: 796 PPPPLPPISSGAPPPPPPP 814
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +2
Query: 824 PPPPRGXXXLGX-PPPPXPPXNXXPPXP 904
PPPPR G PPPP PP P P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPP 152
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 879 GGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
GG GGGG P PRG GG P PP P
Sbjct: 619 GGPGGGGGP----PRGPGGGGGGGPTGPPAPPKP 648
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 894 GXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPP 781
G G GGGG P+ GGGG PP PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGP---TGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 879 GGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
GG GGGG P PRG GG P PP P
Sbjct: 619 GGPGGGGGP----PRGPGGGGGGGPTGPPAPPKP 648
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 894 GXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPP 781
G G GGGG P+ GGGG PP PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGP---TGPPAPPKPP 649
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 760 FFFXXXGGGGGG---GXXXXKKXXXPPXXXGXGFGXPPXP 870
F F GGGGGG G PP G G PP P
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 824 PPPPRGXXXL--GXPPPPXPP 880
PPPP G + G PPPP PP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 824 PPPPRGXXXL--GXPPPPXPP 880
PPPP G + G PPPP PP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPP 481
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G G PPP PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPP 353
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP + P PP P PP P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPP 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP PPPP P PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP 311
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +2
Query: 824 PPPPRGXXXLGXP--PPPXPPXNXXPP 898
PPP R G P PPP PP PP
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP + PPPP PP PP P
Sbjct: 57 PPPP-----MCPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPP L PPPP P PP P
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPP 60
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP PPP PP PP P
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 903 GXGGXXXXGGXGGG-GXPKXXXPRGGGGXXFF 811
G GG GG GGG G RGGGG F+
Sbjct: 65 GRGGGRGYGGRGGGWGGRGGGWGRGGGGRGFY 96
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G G PPP PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPP 363
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPP + P PP P PP P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPP 300
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPP 898
PPPP PPPP P PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP 321
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +2
Query: 824 PPPPRGXXXLGXP--PPPXPPXNXXPP 898
PPP R G P PPP PP PP
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPPPR PPPP PP P P
Sbjct: 784 PPPPRA----SEPPPPPPPPVATAPVP 806
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 921 PXXXXXGXGGXXXXGGXGGGGX--PKXXXPRGGGG 823
P G GG GG GGG P P GGGG
Sbjct: 188 PGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGG 222
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
G GG GG G GG GGG F PPPPPP
Sbjct: 189 GGGGGGMGGGGGSGGS-------GGGSGRF------PPPPPP 217
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 782 GGGGGXXFXXKKXXPPPPRGXXXLGXPPPPXPP 880
G GGG PPP G PPPP PP
Sbjct: 652 GSGGGSSMPMPV---PPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 782 GGGGGXXFXXKKXXPPPPRGXXXLGXPPPPXPP 880
G GGG PPP G PPPP PP
Sbjct: 652 GSGGGSSMPMPV---PPPGGLGGFMPPPPPPPP 681
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGG 823
G GG GG GGG P GGGG
Sbjct: 219 GDGGYGPSGGYGGGYGPGGGYGMGGGG 245
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPP 880
PPPP G G PPPP P
Sbjct: 540 PPPPVGMANGGPPPPPPLP 558
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 897 GGXXXXGGXGGGGXPKXXXPRGGGGXXFFXXXXXPPPPPP 778
GG GG GGGG GG G PPPPPP
Sbjct: 12 GGGGGGGGGGGGGGEAGYS--GGAGVE------APPPPPP 43
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 854 GXPPPPXPPXNXXPPXP 904
G P PP PP N PP P
Sbjct: 815 GGPVPPGPPQNRMPPPP 831
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 824 PPPPRGXXXLGXPPPPXPPXNXXPPXP 904
P PP L PPP PP PP P
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGP 160
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 827 PPPRGXXXLGXPPPPXPPXNXXPPXP 904
PPP G LG PPPP PP P
Sbjct: 88 PPPHG---LGPPPPPPHYYTQPPPPP 110
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 770 FXXGGGGGGXXFXXKKXXPPPPRGXXXLGXPPPPXPP 880
F GG PPPP+ LG PP PP
Sbjct: 365 FPSGGAPSSPSAPEAPSEPPPPKIYPTLGANAPPAPP 401
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 903 GXGGXXXXGGXGGGGXPKXXXPRGGGG 823
G GG GG GGG PRGGGG
Sbjct: 8 GRGGGGFRGGRGGGSG---FTPRGGGG 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,494,713
Number of Sequences: 27780
Number of extensions: 364285
Number of successful extensions: 4328
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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